Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0105 ATGGCAGCTCTGTTACCTTGCGCGCCGAACGTAGTCTCTGCTCCCTTGGGGAACCGGAGCACGTGCCACTTCCCGCACCGACCTTACTCCCACGCTTTCTCCGGTTCGACCGCCAGACACTTTCTTCGCGGTTCGCTTACCGTCGCCCGCTTCGGGTTCCAACCCGGTTTCTTGCCCGAGCCGGACGAAGCTGAAGGTGTTCTCAGAGAACTGTTTGGCCGAGCGGAGGGACTTCTTTACACGATTGCCGATGCCGCCGTTTCTTCTTCCGATACTGTTGCGGCTTCCACCACCGCCAAACAGAGCAACGACTGGCTTTCCGGAATTGCCAATTACATGGAGACCGTTCTCAAGGTACTCAAGGATGGGCTTTCTGCTTTGCATGTCCCGTATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTTGTTAAAGCTGCCACTTTTCCATTAACCAAAAAACAGGTAGAATCTGCCTTAGCTATGCGAACTTTGCAACCTCAAGTAAAGGCTATTCAGCAGCAATATGCTGGCGATCAGGAGAGAATTCAACTTGAAACTGCTCGGTTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTCCCTACACTTGCAACAATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAACGTGGCAGATGAGGGGCTCCTTACTGAAGGTTTCTTCTGGATACCTTCTCTTGCTGGTCCAACTACAGTTGCAGCTCGTCAGAATGGCAGTGGTATCTCTTGGATTTTTCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGTCAGATACATTGGCTTACCTGGTCTTGCCTGTGTTGCTGATTGTCTCTCAGTACATCTCTGTCCAAATAATGCAGTCATCACAGCCAAATGATCCCAACATGAAAAGTTCTCAAGCCTTGACCAAGGTCCTTCCATTAATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTTAGTCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGCGCTAAAAATCCTGTAAGGCAAGTCCCAGATGATATCATGAAGAATGACCTAACACAGGTTCAGAAGTCAATATCTAAGCTAAATTCCACAAAAGCGGAAGAAGCCAGACAAAGTGAGAAAACATCAGAGGGGCCACAACCTGGTGAAAGATTTAAGCTAATAAAGGAGCAAGAGGCAAGAAGAAGACAACGAAAAGAAGAAGAAAGGAAAGCCTTGGAAGCAGCGGCTAGAAAAGCTAAAATAGACGAGACATTTGAGAAAACAGTTGAAGAGGGAAATCAAACTGGAGGTGATCTAGTTGTTGAAAAATCTCGGTTTGTGGCTTCAGATACTGATCCCTCCATATCTGGAGTAGTAAATGGTAATCCATTAAGTAAAGACTTGGAGGGAAATCAGAATTCTACGTCTATATCTGAGACAGAAAATAATGATGGTTCTGCTCATTTCAACAATGTTGAGATAAACGAGAAAAATTTAGACAAGGAACCAAGAGAAGTATTAACAACTACAACCGCCACAAACAAACAACCTCCTGCAGAAGAGACAAAGGATTGA 1605 0.4536 MAALLPCAPNVVSAPLGNRSTCHFPHRPYSHAFSGSTARHFLRGSLTVARFGFQPGFLPEPDEAEGVLRELFGRAEGLLYTIADAAVSSSDTVAASTTAKQSNDWLSGIANYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESALAMRTLQPQVKAIQQQYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWIFPFVDGHPPLGWSDTLAYLVLPVLLIVSQYISVQIMQSSQPNDPNMKSSQALTKVLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDDIMKNDLTQVQKSISKLNSTKAEEARQSEKTSEGPQPGERFKLIKEQEARRRQRKEEERKALEAAARKAKIDETFEKTVEEGNQTGGDLVVEKSRFVASDTDPSISGVVNGNPLSKDLEGNQNSTSISETENNDGSAHFNNVEINEKNLDKEPREVLTTTTATNKQPPAEETKD* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0105 534 Pfam 60Kd inner membrane protein 133 347 IPR001708 GO:0016021|GO:0032977
Gso18g0105 534 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 133 347 IPR028055 -
Gso18g0105 534 MobiDBLite consensus disorder prediction 382 421 - -
Gso18g0105 534 MobiDBLite consensus disorder prediction 456 534 - -
Gso18g0105 534 MobiDBLite consensus disorder prediction 459 503 - -
Gso18g0105 534 PANTHER BNAA09G28180D PROTEIN 26 468 - -
Gso18g0105 534 PANTHER OXA1 26 468 IPR001708 GO:0016021|GO:0032977
Gso18g0105 534 Coils Coil 405 432 - -
Gso18g0105 534 MobiDBLite consensus disorder prediction 377 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0105 Gso-Chr18 849932 855567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0105 71 415 Chloroplast and Mitochondria Gene Families AT2G28800 56.609 3.65e-130 384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0105 18 849932 855567 Gso13g1518 13 30643231 30649370 GST