Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0081 ATGGAAGAGCAAATCAAGTCCGAATTCAAAAGAAGTGGTTTCGGCCTCGAAGACGAACAAGAAATTCTCAGCAAATGTGTCACTTACTGCATCAACTACAGTCTCACTCCTTCCGATCTCGTCTCAAGCTGGGAAGTTTATTACCTCAATAGACAGCTGAACGAACCAATAGTACAAAATACTGAAATTGATGGCTTTCTGTTGCATCTACAAAATGAGAAGAAAGAGACTGTTATAAAGGAAAAGGAGGAAGCTGGCTTGCATATTTACTCTATCGGAGATGTAGAAATGATCTTAAATAATGATGATGATACAAAGGATAATACTCCCGGAACTCCAATAAATCATCATCAAGATCCTTTATCTCCTGCACTTGATACAACATCTTTAATGTATGAGAATGTTTTATCTTCTGGAAAACCATCAAAATCAAAACTAATAACACCCTTTTCAAAGAGAACAGATAAGTTTGTGGTGAAATTTAGCATCAACACTGTCCCTAAAGTAGAGAAGGCTGAAAATGATGAAGATGATGTTCTTACAAGAGTTCCACTCCATGAAAGGTGTTCATTATCCATTCACAGATCAGGACCCAAACCAGGTTGCAGATTTTTGTATGATAGAACAGAGGATAGGCTTAATGCAATAGAAAACCGACTTAGGAAATATACAAGGGCATTTGTAGCTTCTGGGCTCTATGAAGAACCAACAGACCCTACAACTGCTTCACAGAGAAGCATTTTTGCTGTTGGCATGATTTGTTGTGATGGAGAAGGCCGTTTAAATGAGAAGTCTGTCATGCTGCAGAGCAGTATTGAGCATTCTGGAGGAGAATGTGTTCGCCTAGATTTGCAACGTTTAAGCCATTATTCAATTTTTCCTGGCCAGATAGTTGGTATTGGAGGGCATAATCCCAGTGGGCATTGCTTCGTTGCATCTAAATTGGTGGATTCTATACCTACCTACATTGCCAATGAGGATTCAAATCCTGCAAAGAAGCAAGCTGTTGATAAGGAGAATCAGCCAACTGATCTGCTTTGTAAAGAAAGAGAATTATCAATGATTATTGCAGCTGGCCCCTTTACTACAACAGACAATTTGTTGTTTGAGCCTCTTATAGCACTGCTGACACATGCAAAACTAAGACCACCACAGTTGCTTGTATTGCTGGGACCATTTGTTGATTCTGAGCACCCAGACATTAAGAAAGGAACTGTAGACAGGAGTTTTGATGAAATATTTGAGGAAATCCTGAAGAAGTTGGAAGAATATGTAGATTCAGCTACGCGTGTTGTTCTTGTTCCGTCTATACGTGATGCTAACCATGATTTTGTTTTTCCTCAGCCTGCATTGGACATGAAATCTCAGATAGTCAGTCTCAGTAATCCTGGAATCTTTGAGGCAAATAAGGTTAAGGTTGGTTGCTGCACCGTGGATATTCTGAAGCAAATCAGTGGGGAGGAGATATCACGAACTGCAGCAGATGGAAAACCCATTGATCGCTTGAGTAGACTAGCAAACCATATTCTTAACCAACAAAGCTTCTATCCACTTTACCCACCAGCAGAAGGTGTTCCCTTGGACTTTTCGCTTGCTCCAGAAGCCCTTCAACTGTCGTCGATTCCAGACATACTTATACTACCTTCAGACATCAAGTACTTTGTCAAGGTGCTTAGTAGCGAAAATGAAGGGATTAACCACACGAAATGCATAGCCGTCAATCCGGGAAGACTAGCCAAGGGAGAAGGAGGGGGAACTTTTGTTGAGCTTGATTATTGTGGGGGTTCCGACCAAATTAACGCTTCAGTTGTTGGCATATGA 1821 0.4069 MEEQIKSEFKRSGFGLEDEQEILSKCVTYCINYSLTPSDLVSSWEVYYLNRQLNEPIVQNTEIDGFLLHLQNEKKETVIKEKEEAGLHIYSIGDVEMILNNDDDTKDNTPGTPINHHQDPLSPALDTTSLMYENVLSSGKPSKSKLITPFSKRTDKFVVKFSINTVPKVEKAENDEDDVLTRVPLHERCSLSIHRSGPKPGCRFLYDRTEDRLNAIENRLRKYTRAFVASGLYEEPTDPTTASQRSIFAVGMICCDGEGRLNEKSVMLQSSIEHSGGECVRLDLQRLSHYSIFPGQIVGIGGHNPSGHCFVASKLVDSIPTYIANEDSNPAKKQAVDKENQPTDLLCKERELSMIIAAGPFTTTDNLLFEPLIALLTHAKLRPPQLLVLLGPFVDSEHPDIKKGTVDRSFDEIFEEILKKLEEYVDSATRVVLVPSIRDANHDFVFPQPALDMKSQIVSLSNPGIFEANKVKVGCCTVDILKQISGEEISRTAADGKPIDRLSRLANHILNQQSFYPLYPPAEGVPLDFSLAPEALQLSSIPDILILPSDIKYFVKVLSSENEGINHTKCIAVNPGRLAKGEGGGTFVELDYCGGSDQINASVVGI* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0081 606 Pfam DNA polymerase alpha/epsilon subunit B 355 556 IPR007185 GO:0003677|GO:0006260
Gso18g0081 606 Coils Coil 206 226 - -
Gso18g0081 606 PIRSF DNA_pol_alpha_2 1 593 IPR016722 -
Gso18g0081 606 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 604 IPR016722 -
Gso18g0081 606 Gene3D - 1 66 IPR043034 -
Gso18g0081 606 Gene3D - 333 491 - -
Gso18g0081 606 Gene3D - 497 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0081 Gso-Chr18 681110 692181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0081 2 606 Core DNA Replication Machinery Family AT1G67630 58.360 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0081 K02321 - gmx:100797769 1200.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0081 18 681110 692181 Gso13g1540 13 30805470 30811236 GST