Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0075 ATGGCGGCTGGTAGACATGGAGGTTATCGTGACAACGAGTTTAGGGACCGTGAGTCCAATTTTGATGTTTCAAGGCGGGTTTTTAATAATAATTCTAGACAAGAGTATGATAGTATGACGAATGGTAGCCGCGATGTTGTGAGGGTTGGGAGCAAGGATGCAAGAGATAGGATTAGACTGAGGCAGAAAGATATTAGGGAGAGGGAAGCTCCAAATGGTAGCTATTTGAGTAAGAGTGACTCTGGCGGTAGCGGCGGTTGTAGTTGTGGATTTGGTCCCAGAAGATGTGGGTTTTCTGTTAAGACTATGGATAGAGAGCCGGGTGAGCTTTCTAGTGAGAGTGGGTCCGATGATGATGGTATTGAATCAGGATCACAGGAAAAATACTGTGAGGTTGCAACAAGTGAAGGAAACTGTGCACGATCTCCGCTAGAGAGGAAAAGAAAATTTTCTCCAATAGTATGGGATCAGGATGACAACGAAGTCAATAATTTATCCAAACTCAGGGTTGTCACAGCAGTGACTACTCTGCCTCCACTTCCAAGAGTCCATCTGTCACCTAATGTTCCGGATAGAGGAGTTGAAACTCATCCTGTCAAACACACAGAGGCTGAGATTCTTGAGTTACCAACTGTAACTAATCCTCCTTTGCTGTCTGAGTCAGATCAGGATGCTGAGTCTGAGTCTCCTGTTGGTTTGCATTCATTGTTGCCAGATCAGGAAGCCAAGCGACCTGAAGGTGAAGATTATATTCCAACTCATAACATATCATCTTCAAGATGGGCTGCTGGAGATAACTCTCCTGGTGATGAAGGTGAAATAAATGATGACAAGGAAATCCTTAAGAGGAGGAAGCTATCTCCTGAGCTGGGTATGAGAGTAAGAAACAGGATGTCAAGACTAGAGGAATCTAACATAGAAGATTTTGTAGGAGCTAGAGCCAAATCATCTGAATCTGAAGAAAGAGGTAGCCATGGGAGATTATCCAGTGGAGATTATTGTCCTGGTAACATGTCAAGGAAGGATGATTATATGGAGATTGATGGTCAAGGTAGCAGAAGTGAAGCTAGTGGTTATCATTCAGATACAGATTTGGAAGATGATAGCAGAGAAACTTCTGAACCTCCGGTTCCACCACAAAGAGTTGCCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTGAACAAGATAGATGAAGGAACATATGGTGTCGTGTTTAGGGCCAAAGATAAGAAGACTGATGAAATTGTGGCATTGAAAAAGGTGAAGATGGAGAAGGAAAAAGAAGGTTTTCCACTGACTTCTCTCAGGGAAATAAACATTCTTCTTTCCTTTCACCACCCATCCATAGTTGATGTTAAAGAAGTAGTGGTAGGAAGTAACCTTGATAGTATTTTCATGGTTATGGAATACATGGAACATGATCTTAAAGGACTAATGGAGGCAATGAAGCAGCCCTTTAGCCAGAGTGAAGTAAAGTGCTTAATGCTCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGGCAACTGGGTGCTTCATAGGGATTTGAAGACTTCTAACCTGCTTCTGAATAATAGGGGTGAGTTAAAAATTTGTGATTTTGGATTGGCTCGTCAATATGGGAGCCCATTGAAACCATATACACACCTGGTGGTTACTCTTTGGTACAGGGCTCCTGAACTTCTTCTCGGGACAAAACAGTATTCAACAGCCATTGACATGTGGTCTCTGGGTTGTATAATGGCTGAGCTATTGTCCAAGGAACCACTGTTTAATGGGAGGACTGAATTTGAACAACTTGACAAGATTTTCAGAATTCTTGGCACACCAAATGAAACAATTTGGCCTGGGTTCTCAGAATTACCCCGAGTCAAGGTTAATTTTGTCAAGAATAAGTATAATCTCCTGCACAAAAAATTTCCTGCAACATCAGTCACCGGATCACCAGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGTAAAGCGGATCACGGCTGAAGAAGCTCTAAACCATGAGTGGTTTCGTGAAGTTCCCCTTCCGAAGTCTAAAGAATTTATGCCTACATTCCCTGCTCAACATGCTCAGGACAGGCGAATGAGGAAAATATTAAAGAGTCCAGATCCATTAGCAAAGCAACACTGGAAGGAGATGCAGCAGGGTGAATCAGGGACTGGTGGTATTTTTGGTTAA 2226 0.4245 MAAGRHGGYRDNEFRDRESNFDVSRRVFNNNSRQEYDSMTNGSRDVVRVGSKDARDRIRLRQKDIREREAPNGSYLSKSDSGGSGGCSCGFGPRRCGFSVKTMDREPGELSSESGSDDDGIESGSQEKYCEVATSEGNCARSPLERKRKFSPIVWDQDDNEVNNLSKLRVVTAVTTLPPLPRVHLSPNVPDRGVETHPVKHTEAEILELPTVTNPPLLSESDQDAESESPVGLHSLLPDQEAKRPEGEDYIPTHNISSSRWAAGDNSPGDEGEINDDKEILKRRKLSPELGMRVRNRMSRLEESNIEDFVGARAKSSESEERGSHGRLSSGDYCPGNMSRKDDYMEIDGQGSRSEASGYHSDTDLEDDSRETSEPPVPPQRVANMLQGCRSVDEFERLNKIDEGTYGVVFRAKDKKTDEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHGNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGRTEFEQLDKIFRILGTPNETIWPGFSELPRVKVNFVKNKYNLLHKKFPATSVTGSPVLSDSGFDLLNKLLTYDPVKRITAEEALNHEWFREVPLPKSKEFMPTFPAQHAQDRRMRKILKSPDPLAKQHWKEMQQGESGTGGIFG* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0075 741 SMART serkin_6 395 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0075 741 MobiDBLite consensus disorder prediction 98 128 - -
Gso18g0075 741 PANTHER CELL DIVISION PROTEIN KINASE 115 741 - -
Gso18g0075 741 MobiDBLite consensus disorder prediction 1 85 - -
Gso18g0075 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Gso18g0075 741 MobiDBLite consensus disorder prediction 24 45 - -
Gso18g0075 741 MobiDBLite consensus disorder prediction 271 327 - -
Gso18g0075 741 Coils Coil 413 433 - -
Gso18g0075 741 Pfam Protein kinase domain 395 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0075 741 MobiDBLite consensus disorder prediction 48 73 - -
Gso18g0075 741 Gene3D Transferase(Phosphotransferase) domain 1 478 724 - -
Gso18g0075 741 MobiDBLite consensus disorder prediction 359 374 - -
Gso18g0075 741 ProSiteProfiles Protein kinase domain profile. 395 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0075 741 Gene3D Phosphorylase Kinase; domain 1 380 477 - -
Gso18g0075 741 MobiDBLite consensus disorder prediction 214 228 - -
Gso18g0075 741 MobiDBLite consensus disorder prediction 202 381 - -
Gso18g0075 741 CDD STKc_CDC2L1 389 686 IPR045267 GO:0004674|GO:0005524|GO:0006468
Gso18g0075 741 PANTHER - 115 741 - -
Gso18g0075 741 MobiDBLite consensus disorder prediction 8 23 - -
Gso18g0075 741 SUPERFAMILY Protein kinase-like (PK-like) 387 692 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0075 Gso-Chr18 637374 642615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0075 386 705 Core Cell Cycle Gene Families AT5G10270 45.294 1.55e-92 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Gso18g0075 Pkinase 2.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0075 K08818 - gmx:100793729 1312.75