Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso18g0071 | ATGCGAATAATGGATGTTGCTGAGGTTGAAGAAAGTTTTTTTGCAGCAAGCGATGCCAAGTTACATGGAGAAATGTGCAAGTGTCTGTCTGCAATATACTGCAAGATATTGTCATTATTTCCTTCTTTAGAAGCAGCTAGGCCTAGGAGCAAATCTGGAATTCAGGCATTATGTTCATTGCATGTAGCCTTAGAAAAGGCAAAGAATGTTCTTCAGCACTGCTCAGAGTGTAGTAAACTTTACTTGGCTATAACTGGGGATTCTGTTCTGCTAAAATTTGAGAAGGCTAAATGTGCTCTTGGGGACAGTCTTAAACGGGTGGAAGATATTGTTCCTCAATCTATTGGTTGTCAGATTGACGAAATTGTGAAAGAACTTGCAAGTACGGTATTTGCACTTGACCCATCAGAGAAGCAAGTTGGGGATGATTTAATTGCATTGCTTCAGCAGGGAAGAAAGTTTAGTGACTCTAATGATAGTAATGAACTTGAATGTTTTCATCTGGCTGCTACTAGACTTGGAATCACTTCTTCAAGAACAGCTCTTACAGAAAGAAGAGCTCTAAAAAAACTCATAGAAAGGGCTCGTGCTGAGGAAGACAAGCGGAAAGAATCAATTATTGCTTTTCTTTTACACCTTATGAGGAAATATTCCAAGTTATTTAGAAGTGAGTTTTCTGATGACAATGATTCTCAGGGTTCTCAACCTTGTTCTCCCACTGTTCAGAGATCTCTTGAGGATGGCATTCCCGGTGGTCATTGTCATGCCTTTGACAGACAGCTTTCAAAACTTAGTTCCTTTAATTTTAAGCCAAATAATAGGAAATCAGGGCAGATGCTCCTTCCGCCAGAAGAGTTAAGGTGCCCAATATCTCTGCAACTTATGAGTGATCCTGTTATAATTGCTTCTGGGCAAACATATGAAAGGGTTTGTATAGAGAAATGGTTCAGAGATGGGCACAACACCTGCCCAAAGACTCAACAGAAACTTTCACATCTTTGTTTGACTCCTAATTACTGTGTTAAGGGTCTTGTAGCTAGTTGGTGTGAACAGAATGGAGTTCCTATTCCTGAAGGCCCTCCTGAATCTCTTGATTTTAACTACTGGAGATTGGCATTATCAGACACTGAATCCACAAATTCAAGATCCGTAAACAGTGTTGGCTCTTGCAAGTTGAAGGGTGTCAAAGTTGTTCCTGTAGAAGAGAGTGGTATCTCAGAGCAAATGGGGGGAAATGCTACTGAAAGTTTTTCTGCGCAAGAGGAAGATAATGAACAGTATGTTAGTTTTCTTAAAGTCTTGACAGAAGGGAACAATTGGAAGAGGAAGTGTAAAGTGGTTGAACAGTTGAGGCTGTTGCTGCGGGATGATGAGGAAGCCAGGATTTTTATGGGGGCCAATGGATTTGTTGAAGCACTTATGCAGTTTCTGCAATCAGCTGTGCATGAAGCGAATGCGATGGCTCTTGAAATTGGTGCCATGGCTCTGTTCAACCTGGCTGTGAATAACAATAGAAATAAGGAAATTATGATATCAACAGGAATCTTGTCGTTGTTGGAGGAAATGATTTCAAAAACTAGTTCCTACGGTTGTGCAGTTGCCCTGTATCTGAATCTTTCTTGCCTCGATAAAGCCAAGCATATGATTGGCACAAGTCAGGCTGTCCAGTTCCTAATCCAGATTCTTGAAGCCAAGACAGAAGTCCAGTGCAAGATAGATTCCCTCCATGCACTCTATAACCTTTCTACTGTGCCCTCAAATATTCCAAACCTCCTTTCGTCTGGCATCATGGATGGCCTACAATCCCTTCTTGTAGACCAGGGTGATTGCATGTGGACAGAAAAATGCATAGCTGTTTTGATAAATTTGGCGGTTTATCAAGCAGGAAGAGAGAAAATGATGTTGGCTCCTGGACTTATAAGTGCCTTGGCTTCCACACTAGATACCGGTGAGCCCATAGAGCAGGAACAAGCTGCTTCTTGTCTCCTAATTTTGTGTAACAGGAGTGAGGAATGTTGTCAGATGGTCCTGCAAGAAGGGGTTATACCTGCATTGGTGTCAATATCAGTGAATGGGACCTCGAGAGGAAGAGAGAAGGCTCAGAAGCTCTTGATGGTCTTCAGAGAGCAGCGACAACGAGACCATTCTCCTGTTAAGATTGATCAACCTGAATCCGAAAGTAGTGATTTGTCTATGCCTCCTCCTGACACCAAACCGCTATCTAAAACAATATCTAGAAGAAAGGTGGTGGGGAAAGCTTTTAGCTTTCTCTGGAAAAGCAAGAGCTATTCTGTTTACCAGTGTTAA | 2307 | 0.4179 | MRIMDVAEVEESFFAASDAKLHGEMCKCLSAIYCKILSLFPSLEAARPRSKSGIQALCSLHVALEKAKNVLQHCSECSKLYLAITGDSVLLKFEKAKCALGDSLKRVEDIVPQSIGCQIDEIVKELASTVFALDPSEKQVGDDLIALLQQGRKFSDSNDSNELECFHLAATRLGITSSRTALTERRALKKLIERARAEEDKRKESIIAFLLHLMRKYSKLFRSEFSDDNDSQGSQPCSPTVQRSLEDGIPGGHCHAFDRQLSKLSSFNFKPNNRKSGQMLLPPEELRCPISLQLMSDPVIIASGQTYERVCIEKWFRDGHNTCPKTQQKLSHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDFNYWRLALSDTESTNSRSVNSVGSCKLKGVKVVPVEESGISEQMGGNATESFSAQEEDNEQYVSFLKVLTEGNNWKRKCKVVEQLRLLLRDDEEARIFMGANGFVEALMQFLQSAVHEANAMALEIGAMALFNLAVNNNRNKEIMISTGILSLLEEMISKTSSYGCAVALYLNLSCLDKAKHMIGTSQAVQFLIQILEAKTEVQCKIDSLHALYNLSTVPSNIPNLLSSGIMDGLQSLLVDQGDCMWTEKCIAVLINLAVYQAGREKMMLAPGLISALASTLDTGEPIEQEQAASCLLILCNRSEECCQMVLQEGVIPALVSISVNGTSRGREKAQKLLMVFREQRQRDHSPVKIDQPESESSDLSMPPPDTKPLSKTISRRKVVGKAFSFLWKSKSYSVYQC* | 769 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso18g0071 | 768 | SUPERFAMILY | ARM repeat | 432 | 704 | IPR016024 | - | |
| Gso18g0071 | 768 | SMART | Ubox_2 | 285 | 348 | IPR003613 | GO:0004842|GO:0016567 | |
| Gso18g0071 | 768 | Coils | Coil | 178 | 198 | - | - | |
| Gso18g0071 | 768 | CDD | RING-Ubox_PUB | 286 | 328 | IPR045210 | - | |
| Gso18g0071 | 768 | ProSiteProfiles | U-box domain profile. | 281 | 355 | IPR003613 | GO:0004842|GO:0016567 | |
| Gso18g0071 | 768 | MobiDBLite | consensus disorder prediction | 711 | 742 | - | - | |
| Gso18g0071 | 768 | SMART | arm_5 | 457 | 501 | IPR000225 | GO:0005515 | |
| Gso18g0071 | 768 | SMART | arm_5 | 626 | 667 | IPR000225 | GO:0005515 | |
| Gso18g0071 | 768 | SMART | arm_5 | 542 | 583 | IPR000225 | GO:0005515 | |
| Gso18g0071 | 768 | PANTHER | U BOX DOMAIN-CONTAINING | 4 | 750 | - | - |
Showing 1 to 10 of 16 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso18g0071 | - | - | gmx:100804344 | 1419.06 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso18g0071 | 18 | 609706 | 615010 | Gso13g1550 | 13 | 30881961 | 30887325 | GST | |
| Gso18g0071 | 18 | 609706 | 615010 | Gso5g1242 | 5 | 35929633 | 35934594 | PCT | |
| Gso18g0071 | 18 | 609706 | 615010 | Gso8g0858 | 8 | 7954481 | 7959513 | PCT | |
| Gso5g1242 | 5 | 35929633 | 35934594 | Gso18g0071 | 18 | 609706 | 615010 | PCT | |
| Gso8g0858 | 8 | 7954481 | 7959513 | Gso18g0071 | 18 | 609706 | 615010 | PCT |
Showing 1 to 5 of 5 entries