Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0040 ATGTGGGGCAAGATATTGAAATCCATAAGGAAAAGTCTCATAAGCCTTCAACAGAAGTGTATGAATTCTCGAAAGAGTGAAGTTGATAGTAGTGTGTCAGTGCATGGTGTGCAGTGGGCAAATTGCAAGTGTTGCATAGAGGAAAGCAATTGTGACCACATTAATGCCGCAGAAGGCGCAAGTAATGTCGACGCCCAGCGTGATGCTAACGCCAACAGTTCTTTCACTCATGCTGTCATTAACATGGTGGGGATGCTCATAGGTTTGGGGCAACTGTCAACTCCATATGCTGTAGAAAATGGAGGGTGGTCATCTGCATTCTTGCTTATGGGACTAGGGATGATGTGTGCTTATAGTTCTCACATACTTGGAATATGCCTTAGAAAGAATCCCAAGTTAACAAGTTTCGTGGATATTGGGAAGCATGCATTTGGATCAAAAGGAAGAAACGTGGCTGCAACAATCATCTACATGGAAATCTTCATGGCCCTCGTTTCCTACACCATCTCACTACATGATAATTTGACCACAGTCTTTTTGGGGACAAATTTGAATCTGCACTTGCCTAACTTTTCTTCATCCCAGCTCCTAACCGTGGTGGCAGTCTTGATTGCCATGCCTAGTTTGTGGATCAGAGACCTTTCTTCCATATCTTTCCTTTCAAGTGTTGGCATTCTCATGTCTCTGCTCATTTTCCTGTGTGTAGCAGCCACTGCACTCTTAGGATATGTCCAATCTAATCATACCATACCTGTCCTCCACCTCCATAATATTCCATCCGTATCTGGCCTTTACGTTTTCGGCTATGGAGGACATATTGTTTTCCCTGAATTATATACAGCCATGAAAGACCCCTCCAAATTTACCAAGGTTTCTATAGTGAGCTTCGCGGTAGTTACAGCAATTTACACGACATTGGGGTTCATGGGTGCGAAGATGTTTGGTAAGGATGTGAAGTCTCAGATCACACTTAGCATGGCACCGGAGCACATCGTAACAAAGATTGCTCTGTGGGCAACCGTGGTGGCACCCATGACCAAATATGCGCTAGAATTCACCCCATTTGCAATTCAACTAGAGCATGCACTTCCAAGTTCCATGAGTGCCAGGACCAAAACGATAATTAGAGGCTGCATAGGTTCATTTTCACTTTTGGTCATACTAACCCTTGCTCTCTCGGTTCCATATTTTGAGCATGTACTAAGTCTCACTGGTTCCCTTGTTAGTGTTGCCGTTTGTTTAATTTTGCCTTGTGCTTTCTACGTTAAGATATGTTGGGGTCAGATATCAAAGCCTCTCTTACTCCTAAACCTCTTTCTCATCATATTCGGCTTTGTTCTTGCCGTGATGGGCACCATTTCCTCCTCACAGTTACTACTCAAAAATCTTCAATCACATAACTTGAGGCACAAGGAATGA 1419 0.4348 MWGKILKSIRKSLISLQQKCMNSRKSEVDSSVSVHGVQWANCKCCIEESNCDHINAAEGASNVDAQRDANANSSFTHAVINMVGMLIGLGQLSTPYAVENGGWSSAFLLMGLGMMCAYSSHILGICLRKNPKLTSFVDIGKHAFGSKGRNVAATIIYMEIFMALVSYTISLHDNLTTVFLGTNLNLHLPNFSSSQLLTVVAVLIAMPSLWIRDLSSISFLSSVGILMSLLIFLCVAATALLGYVQSNHTIPVLHLHNIPSVSGLYVFGYGGHIVFPELYTAMKDPSKFTKVSIVSFAVVTAIYTTLGFMGAKMFGKDVKSQITLSMAPEHIVTKIALWATVVAPMTKYALEFTPFAIQLEHALPSSMSARTKTIIRGCIGSFSLLVILTLALSVPYFEHVLSLTGSLVSVAVCLILPCAFYVKICWGQISKPLLLLNLFLIIFGFVLAVMGTISSSQLLLKNLQSHNLRHKE* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0040 472 Pfam Transmembrane amino acid transporter protein 72 454 IPR013057 -
Gso18g0040 472 PANTHER AMINO ACID TRANSPORTER AVT1H 55 465 - -
Gso18g0040 472 PANTHER OS05G0424000 PROTEIN-RELATED 55 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0040 Gso-Chr18 366665 370215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0040 42 463 Amino Acid or Auxin Permease AAAP Family AT5G16740 60.563 5.53e-166 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0040 - - gmx:100790897 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0040 18 366665 370215 Gso13g1582 13 31114471 31117909 GST