LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso18g0015	ATGTGTTCAGTGATCATCAATATGAGAATGTTGCCTGTTTGCTCAGCCACCCCACGTTATTCCACATCTTCCCAGATTCCCTTGTTTGGGGGATTGCACCCCATTCGAAAGGATCTTGAGAGCAGATGTGTGGCTGAAGAAGGTGTGCATTTGGCTTCACAATATGGAACTCATTCACTGAGAAATTCATTTGCAGTGCAAGCTACAAAGACAGTATTGGGTAGTTTTTCTTCTACAAGTGAACCGGGATACCTTACAAGCACGTGGGATTATTTACCAGTGACAACAGATGGGCATCATTCTCTGAGTGATGGGGAAGTCAGACACATGGAATATTATCATCTATCTACTGTGCCTGATGAATTTGCAGATTTTGCAGAACAGGTAACTGAAGGATCTAACACATTAGTGACACCAGCACAACCAGAAACACTATCGACTGCTGATATAATGCCAGAGAACTTTGCACCAAGTCCTAGTTCAATTAATGTGGACAATGAATCATTAGTCAGTACAAAAGCAAGTGTTGGAGACCTTGTTGCCGGAATCAATGAATCATTCAGTGCCTCAATCAATAAGGGAGAAAATGCTTTACGAAGCTCACTGGATACAGCTACTTCTTTTGTAGATTCTATTGTTAAAACTGCTACTAAATCTGTAGATAATGCTTTTAGTAAGGCATTTTCTTCTGTTGATCAAACAGGGGAATTAACAAATAAGAAGTTAACCAGCTTTTCAAGTGAGCTGACTGGAGTCACAAATAAAGCACCTGCTGTGGCTATTGATGTGTTGCGCCGCACAATTATAGTTGTAGAGAGTTCTCTAACAAGTGGGGCTTCATATGTTGTCTACCTATATGGCTCAGCAAAGGAGCTCCTTCCAGCAGGAATTAGGGATACAGTCAATGTATATGAAGATAAAGCAACAGAAATCTTGAGGCCAGTTGGGTCTGCAACTCAAAGGTTATACATGGCTGTCTATTCATTGGAGAAGAGTCTTGGCTTGGATCCAAATGACCCAATCATTCCATTTGTTGTTCTTTTAGGCTCTTCAGCCACATTATGGGCCTTTTATTGGTTGTGGACATATGGAGGTTACTCAGGAGATTTGTCCCCTAAATCAGCTTTTGAGCTTTTGGCCGAGGATGCAAATGCTGCACTTATTGATGTCCGTTCTGAGGAAATGCGAGAAAAATATGGCATTCCTGATCTCCGACGGGCTGCTAGGTTTCGTTATGCAAGTATAACTCCTCTTGAGGTTGATGGCTCCATACGCAAGTTGTTGAAGAGTGGTAGAGAACTTGATGATTCCTTGATTGCTGCTATTATTCGAAATTTGAAGATGGTTAAGGACAGTTCCAGGGTTATAGTGTTGGATGCTGATGGTACTCGTTCTAAAGGCATTGCAAGATCCTTGAGGAAAATTGGGCTCAAGAATCCATACTTGGTTCAAGGTGGCTTTCAGTCTTGGATGCAACAAGGTCTCCGCATCAAGGAACTCAAACCTGAGACAGCACTTTCCATACTCAATGAGGAAGCTGAAGCAATTCTGGAGGATGTTAGTCCTTCTCCTGGGCAACTTTTAGGTTATGGTACAGTACTTATTGCAGGGCTTTATGCATTACTAGAATGGGAGAAGACATTACAGTTGATTGGTGCTTTTGGCCTCGGTTTGACCATCTATTTGCGGGTTTCTTCATATGAAAAGTCAGAAGATCTAAAACAAGATGTGAGGTTGTTGCTTTCTCCTGTTAGACTTGGAGCTCAAGCATTTTCATGGGCTGCTGGAAAATTAGAATCAAATGGCTTAGGATTACCTACATCACCATCATCATCAGATGTTCAGAACCGGGTGTTGCAGGCTGCTGCCAAACATGAATCCCAACCATCCGATAGTGAAGGTAACCAAGATCCAGTACCTGAACCGACAGTTCCTCTCAATCAGAATGTATGA	1953	0.4214	MCSVIINMRMLPVCSATPRYSTSSQIPLFGGLHPIRKDLESRCVAEEGVHLASQYGTHSLRNSFAVQATKTVLGSFSSTSEPGYLTSTWDYLPVTTDGHHSLSDGEVRHMEYYHLSTVPDEFADFAEQVTEGSNTLVTPAQPETLSTADIMPENFAPSPSSINVDNESLVSTKASVGDLVAGINESFSASINKGENALRSSLDTATSFVDSIVKTATKSVDNAFSKAFSSVDQTGELTNKKLTSFSSELTGVTNKAPAVAIDVLRRTIIVVESSLTSGASYVVYLYGSAKELLPAGIRDTVNVYEDKATEILRPVGSATQRLYMAVYSLEKSLGLDPNDPIIPFVVLLGSSATLWAFYWLWTYGGYSGDLSPKSAFELLAEDANAALIDVRSEEMREKYGIPDLRRAARFRYASITPLEVDGSIRKLLKSGRELDDSLIAAIIRNLKMVKDSSRVIVLDADGTRSKGIARSLRKIGLKNPYLVQGGFQSWMQQGLRIKELKPETALSILNEEAEAILEDVSPSPGQLLGYGTVLIAGLYALLEWEKTLQLIGAFGLGLTIYLRVSSYEKSEDLKQDVRLLLSPVRLGAQAFSWAAGKLESNGLGLPTSPSSSDVQNRVLQAAAKHESQPSDSEGNQDPVPEPTVPLNQNV*	651

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gso18g0015	650	PANTHER	RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN	10	649	-	-
Gso18g0015	650	PANTHER	RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN	10	649	IPR044690	GO:0009704\|GO:0071277\|GO:0090333
Gso18g0015	650	ProSiteProfiles	Rhodanese domain profile.	381	499	IPR001763	-
Gso18g0015	650	MobiDBLite	consensus disorder prediction	604	650	-	-
Gso18g0015	650	Gene3D	-	366	519	IPR036873	-
Gso18g0015	650	Pfam	Rhodanese-like domain	377	491	IPR001763	-
Gso18g0015	650	SUPERFAMILY	Rhodanese/Cell cycle control phosphatase	354	497	IPR036873	-
Gso18g0015	650	SMART	rhod_4	371	496	IPR001763	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso18g0015	Gso-Chr18	161962	170213	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso18g0015	343	460	Sulfurtransferasese or Rhodanese	AT5G23060	29.365	1.39e-12	67.4

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso18g0015	-		-	gmx:100786123	1264.21

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso18g0015	18	161962	170213	Gso13g1607	13	31301168	31309348	GST

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