Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0015 ATGTGTTCAGTGATCATCAATATGAGAATGTTGCCTGTTTGCTCAGCCACCCCACGTTATTCCACATCTTCCCAGATTCCCTTGTTTGGGGGATTGCACCCCATTCGAAAGGATCTTGAGAGCAGATGTGTGGCTGAAGAAGGTGTGCATTTGGCTTCACAATATGGAACTCATTCACTGAGAAATTCATTTGCAGTGCAAGCTACAAAGACAGTATTGGGTAGTTTTTCTTCTACAAGTGAACCGGGATACCTTACAAGCACGTGGGATTATTTACCAGTGACAACAGATGGGCATCATTCTCTGAGTGATGGGGAAGTCAGACACATGGAATATTATCATCTATCTACTGTGCCTGATGAATTTGCAGATTTTGCAGAACAGGTAACTGAAGGATCTAACACATTAGTGACACCAGCACAACCAGAAACACTATCGACTGCTGATATAATGCCAGAGAACTTTGCACCAAGTCCTAGTTCAATTAATGTGGACAATGAATCATTAGTCAGTACAAAAGCAAGTGTTGGAGACCTTGTTGCCGGAATCAATGAATCATTCAGTGCCTCAATCAATAAGGGAGAAAATGCTTTACGAAGCTCACTGGATACAGCTACTTCTTTTGTAGATTCTATTGTTAAAACTGCTACTAAATCTGTAGATAATGCTTTTAGTAAGGCATTTTCTTCTGTTGATCAAACAGGGGAATTAACAAATAAGAAGTTAACCAGCTTTTCAAGTGAGCTGACTGGAGTCACAAATAAAGCACCTGCTGTGGCTATTGATGTGTTGCGCCGCACAATTATAGTTGTAGAGAGTTCTCTAACAAGTGGGGCTTCATATGTTGTCTACCTATATGGCTCAGCAAAGGAGCTCCTTCCAGCAGGAATTAGGGATACAGTCAATGTATATGAAGATAAAGCAACAGAAATCTTGAGGCCAGTTGGGTCTGCAACTCAAAGGTTATACATGGCTGTCTATTCATTGGAGAAGAGTCTTGGCTTGGATCCAAATGACCCAATCATTCCATTTGTTGTTCTTTTAGGCTCTTCAGCCACATTATGGGCCTTTTATTGGTTGTGGACATATGGAGGTTACTCAGGAGATTTGTCCCCTAAATCAGCTTTTGAGCTTTTGGCCGAGGATGCAAATGCTGCACTTATTGATGTCCGTTCTGAGGAAATGCGAGAAAAATATGGCATTCCTGATCTCCGACGGGCTGCTAGGTTTCGTTATGCAAGTATAACTCCTCTTGAGGTTGATGGCTCCATACGCAAGTTGTTGAAGAGTGGTAGAGAACTTGATGATTCCTTGATTGCTGCTATTATTCGAAATTTGAAGATGGTTAAGGACAGTTCCAGGGTTATAGTGTTGGATGCTGATGGTACTCGTTCTAAAGGCATTGCAAGATCCTTGAGGAAAATTGGGCTCAAGAATCCATACTTGGTTCAAGGTGGCTTTCAGTCTTGGATGCAACAAGGTCTCCGCATCAAGGAACTCAAACCTGAGACAGCACTTTCCATACTCAATGAGGAAGCTGAAGCAATTCTGGAGGATGTTAGTCCTTCTCCTGGGCAACTTTTAGGTTATGGTACAGTACTTATTGCAGGGCTTTATGCATTACTAGAATGGGAGAAGACATTACAGTTGATTGGTGCTTTTGGCCTCGGTTTGACCATCTATTTGCGGGTTTCTTCATATGAAAAGTCAGAAGATCTAAAACAAGATGTGAGGTTGTTGCTTTCTCCTGTTAGACTTGGAGCTCAAGCATTTTCATGGGCTGCTGGAAAATTAGAATCAAATGGCTTAGGATTACCTACATCACCATCATCATCAGATGTTCAGAACCGGGTGTTGCAGGCTGCTGCCAAACATGAATCCCAACCATCCGATAGTGAAGGTAACCAAGATCCAGTACCTGAACCGACAGTTCCTCTCAATCAGAATGTATGA 1953 0.4214 MCSVIINMRMLPVCSATPRYSTSSQIPLFGGLHPIRKDLESRCVAEEGVHLASQYGTHSLRNSFAVQATKTVLGSFSSTSEPGYLTSTWDYLPVTTDGHHSLSDGEVRHMEYYHLSTVPDEFADFAEQVTEGSNTLVTPAQPETLSTADIMPENFAPSPSSINVDNESLVSTKASVGDLVAGINESFSASINKGENALRSSLDTATSFVDSIVKTATKSVDNAFSKAFSSVDQTGELTNKKLTSFSSELTGVTNKAPAVAIDVLRRTIIVVESSLTSGASYVVYLYGSAKELLPAGIRDTVNVYEDKATEILRPVGSATQRLYMAVYSLEKSLGLDPNDPIIPFVVLLGSSATLWAFYWLWTYGGYSGDLSPKSAFELLAEDANAALIDVRSEEMREKYGIPDLRRAARFRYASITPLEVDGSIRKLLKSGRELDDSLIAAIIRNLKMVKDSSRVIVLDADGTRSKGIARSLRKIGLKNPYLVQGGFQSWMQQGLRIKELKPETALSILNEEAEAILEDVSPSPGQLLGYGTVLIAGLYALLEWEKTLQLIGAFGLGLTIYLRVSSYEKSEDLKQDVRLLLSPVRLGAQAFSWAAGKLESNGLGLPTSPSSSDVQNRVLQAAAKHESQPSDSEGNQDPVPEPTVPLNQNV* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0015 650 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 10 649 - -
Gso18g0015 650 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 10 649 IPR044690 GO:0009704|GO:0071277|GO:0090333
Gso18g0015 650 ProSiteProfiles Rhodanese domain profile. 381 499 IPR001763 -
Gso18g0015 650 MobiDBLite consensus disorder prediction 604 650 - -
Gso18g0015 650 Gene3D - 366 519 IPR036873 -
Gso18g0015 650 Pfam Rhodanese-like domain 377 491 IPR001763 -
Gso18g0015 650 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 354 497 IPR036873 -
Gso18g0015 650 SMART rhod_4 371 496 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0015 Gso-Chr18 161962 170213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0015 343 460 Sulfurtransferasese or Rhodanese AT5G23060 29.365 1.39e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0015 - - gmx:100786123 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0015 18 161962 170213 Gso13g1607 13 31301168 31309348 GST