Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0013 ATGAATTCGAACCCAAATGAAACCATGTTCCTTTCAATTACACCAGTGGATGAGGCGACGCACAGGTACACTGTATGCCTTGCTGCGCCACCCCATATTGTGTCAGATGGGTTATGGGGTAGTGCTGCAGCAAATAGGAAACCAATGAAATCTTTTCTCCCATTGTTTGAGTTACAGGTCCTTTTAATATTTGCCATCACCCAAATCTGTCGTCTCCTCCTCAATCCCTTGGGCCTCCCTATATTTATTTCACAGATGTTGGCTGGCCTCATTCTTCAAGCTTGTTTTGCGTTGGATCCATTTGCCTCATACATGAGGCTCTTGTTTCCGTATGGAACTCACGACACCATTACCACAATATCATCTATTGGTTTTGTTCTCTTCATTTTTATAAACGGTGTACAAATGGATTTTGGTTTGATAACAAGGATGGGTAAGAGGGCATGGACCATTGCCATATCCGGATTGCTAGTACCCATATTTTGTGCCATTTCCATACTAAGCTTATTTCCATTTGGCCACTCTGGAAACTACGATGATTTGGTTGTTGCATTGGTCTCCCACACCGTAATTTCATTTGCGGTCATTTCTTCCTTTCTTAATGAACTTCAAATCCAAAACTCCGAACTTGGGAAATTGGCATTATCTTCAGCATTGATCAGTGACGTATTGTGCACAATCGTTACCTCCACCGGCACTGCTGTTATGGTTACTGAGGATTCTAATGTCAAAGAGGTTACAAGAAACATCTTGTCTTTGATATGCATGGGTATCTTAATCCCATTAGTGTGTCGCCCAGCAATGTTATGGATCATCAAACATACCCCGGAAGGGAGAGCTGTGAAGGATGGTTACGTTTATGTTATCATCGTACTGCTCTTCATTTTAGGTTGGCTTTCCGTTAAAATAAATCAAGAATTCGTGCTTGGAGCTTTCATTTTGGGATTGTCTGTTCCAGAAGGACCTCCACTAGGATCTGCATTGGTTAAGAAGCTTAATTTCTTTGGTACCACCTTCCTTTTGCCAATCTTCGTCTCTATCAGTGTGTTGAAAGCAGATTTTTCCGCCACTCATTCATCCACATCAGTTATGACTATGACTTTCGTCGTCATCTTCACTCATTTGGTTAAAATCATAGCATGCCTTGTACCTTCCCTCTATTGCAACATGCCGTGGCGTGATGCTCTCTCTCTTGCCCTCATTTTGAACACCAAAGGCGTTGTGGAAATTGGCCTCTTCTGCTTCTTATACGACACCAAGGTAATTGATGGGCTAGGATTCGGAGTAATGATTTTGAGCATAATGGTGGTAGCATGCATTGTGCAATGGTCTGTCAAGTTTTTGTATGACCCTTCAAGAAAATTCGCTGGATACCAGAAAAGGAACATGATGAATTTAAAACCGTGGTCTGAGCTGAGGATGCTGGTGTGCATTCATAAACCAAGTCACATATCGTCAATGATAGATGTGCTTGACCTGTGTTGTCCAACAACAGAAAGTCCAATCATTGTGGAAGTATTGCATCTAATAGAGCTAGTTGGACGCGCCCTACCCATTTTTATTCCCCATCGCCTTCGAAGGCAAGCATCAGGATTGCAACACAAGTCATACTCTGATGATGTCATTCTTACTTTTGACATTTATGAGCATGACAACCCACATGCTGTATCTGCATACCCTTGCACAGCAATAGCTCCACCCAACCTCATGCATGAAGATGTTTGCAACCTTGCCTTTGACAAAGTTGCTTCCATCATAATTCTTCCATTTCATCAAAGATGGTCTAGTGATGGGGAAGTTCAATTTGATGACAAGAACATAAGGACACTAAATAATAGGGTCCTAGAAATATCTCCATGCTCGGTTGGAATACTTGTGACTCGTGCCTCTCACCAAATTAGAGGTTCAACCACTCGATTAGCACTAATTTATTTGGGCGGACATGATGATGAAGAGGCATTGTGCATAGCTAGGAGAGCAATTAGGAACCCAGAGGTGAACCTTGTTGTTTACCACCTTGTTTTTAAAGAAGATGATGAGTGGGGACAAGAAGTGGATGATGAGCTAGAAGATGTGAAGCATGCACATGAACATAATATAAGGTATCAACAAATCATAGCAAAAGAAGGGGCCCAGACAGCTGCTTTTCTTAGTGACATAGTGAAAGAGCATGACTTCTTTCTAGTTGGGAGGCGCCATGGGATTGAGTCCCCTCAAACTGATGGACTTACAGACTGGAGCGAATTCCCAGAATTAGGTGTCATTGGTGATTTTCTTGCTTCACCAGATTTGGAGAGTCGTGCATCAATTTTGGTCGTGCAACAACAACTCTCATCAAAGGCACATTCTGGCTGGTTATTTTAG 2364 0.4226 MNSNPNETMFLSITPVDEATHRYTVCLAAPPHIVSDGLWGSAAANRKPMKSFLPLFELQVLLIFAITQICRLLLNPLGLPIFISQMLAGLILQACFALDPFASYMRLLFPYGTHDTITTISSIGFVLFIFINGVQMDFGLITRMGKRAWTIAISGLLVPIFCAISILSLFPFGHSGNYDDLVVALVSHTVISFAVISSFLNELQIQNSELGKLALSSALISDVLCTIVTSTGTAVMVTEDSNVKEVTRNILSLICMGILIPLVCRPAMLWIIKHTPEGRAVKDGYVYVIIVLLFILGWLSVKINQEFVLGAFILGLSVPEGPPLGSALVKKLNFFGTTFLLPIFVSISVLKADFSATHSSTSVMTMTFVVIFTHLVKIIACLVPSLYCNMPWRDALSLALILNTKGVVEIGLFCFLYDTKVIDGLGFGVMILSIMVVACIVQWSVKFLYDPSRKFAGYQKRNMMNLKPWSELRMLVCIHKPSHISSMIDVLDLCCPTTESPIIVEVLHLIELVGRALPIFIPHRLRRQASGLQHKSYSDDVILTFDIYEHDNPHAVSAYPCTAIAPPNLMHEDVCNLAFDKVASIIILPFHQRWSSDGEVQFDDKNIRTLNNRVLEISPCSVGILVTRASHQIRGSTTRLALIYLGGHDDEEALCIARRAIRNPEVNLVVYHLVFKEDDEWGQEVDDELEDVKHAHEHNIRYQQIIAKEGAQTAAFLSDIVKEHDFFLVGRRHGIESPQTDGLTDWSEFPELGVIGDFLASPDLESRASILVVQQQLSSKAHSGWLF* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0013 787 Gene3D - 56 455 IPR038770 -
Gso18g0013 787 Pfam Sodium/hydrogen exchanger family 61 440 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso18g0013 787 PANTHER CATION/H + ANTIPORTER 16 782 - -
Gso18g0013 787 PANTHER CATION/H+ EXCHANGER 3 16 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0013 Gso-Chr18 154227 156687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0013 25 776 Antiporter Super Family AT5G22900 36.737 4.87e-158 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0013 - - gmx:100785062 1568.52