Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2222 ATGGATCCCTACAAGAATCGGCCATCAAGCGCCTTCAATTCTCCCTTCTGGACTACAAATTCCGGTGCTCCCATCTGGAACAATAACTCATCGCTGACTGTTGGATCTAGAGGTCCAATTCTGCTGGAGGATTACCATCTGGTGGAGAAGCTTGCAAACTTTGACAGGGAACGGATCCCCGAACGTGTTGTCCACGCTCGTGGAGCTAGCGCAAAGGGTTTCTTTGAAGTCACGCATGACATTTCTCACCTCACATGTGCCGATTTCCTTCGAGCCCCTGGAGTTCAGACCCCCCTCATCGTCCGTTTCTCCACTGTTATCCACGAGCGTGGCAGCCCCGAAACCCTCAGGGATCCCAGAGGTTTTGCTGTCAAATTCTACACCAGAGAGGGTAACTTCGACCTTGTGGGAAACAACTTCCCTGTCTTCTTCGTCCGCGATGGCCTCAAGTTTCCTGACATGGTTCATGCCCTCAAACCCAACCCCAAGTCCCACATCCAGGAGAATTGGAGGATCCTCGATTTCTTCTCCCACCATCCCGAAAGCCTTCACATGTTCTCCTTCTTATTCGACGACGTTGGTATCCCTCAAGATTACAGGCATATGGATGGCTTCGGTGTCAACACCTACACCCTTATCAACAAGGCCGGCAAAGCACTCTATGTCAAATTTCATTGGAAGACCACCTCTGGCGAAAAGTCTCTTTTGGACGACGAGGCCATCAGGGTTGGAGGATCCAACCACAGTCATGCCACCCAGGACCTTTACGATTCAATTGCTGCTGGAAACTATCCTGAGTGGAAACTCTACATCCAAACATTGGATCCCGAAAACGAAGACAGGCTTGACTTTGACCCCCTTGATGTTACTAAGACCTGGCCCGAGGACGTTTTGCCCCTCCAGCCTGTTGGCCGCATGGTCTTGAATAAGAACATTGATAACTTCTTTGCCGAGAATGAACAACTTGCATTTTGCCCTGCCATTATTGTACCTGGTGTATACTACTCCGATGATAAATTGCTTCAAACTCGCGTATTCTCCTATGCTGATACCCAGAGACACAGACTTGGACCAAATTATCTGCAGCTTCCTGCTAATGCCCCTAAGTGTGCCCATCACAACAATCACCATGATGGTTTCATGAATTTCATGCACAGGGATGAAGAGGTCAATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCGGAAAAGGTCCCCGTTCCTCCTCGTATCCTAGGTGGGAAGCGTGAAAAGTGCATGATTGAGAAGGAGAACAACTTCAAGCAACCTGGGGAGAGATACCGATCCTGGCCCTCTGACAGGCAAGAAAGGTTTGTCCGCCGATGGGTTGATGCTTTGTCTGACCCACGTGTCACCCATGAAATCCGTAGCATCTGGATATCATACTGGTCTCAGGCTGATCGTTCTCTTGGACAAAAGATAGCATCTCACCTGAACTTGAAGCCAAGTATCTAA 1479 0.4922 MDPYKNRPSSAFNSPFWTTNSGAPIWNNNSSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGLKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFSFLFDDVGIPQDYRHMDGFGVNTYTLINKAGKALYVKFHWKTTSGEKSLLDDEAIRVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTLDPENEDRLDFDPLDVTKTWPEDVLPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRVFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAEKVPVPPRILGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2222 492 CDD catalase_clade_1 16 484 - -
Gso17g2222 492 Gene3D Catalase core domain 8 491 - -
Gso17g2222 492 ProSiteProfiles catalase family profile. 14 492 IPR018028 GO:0004096|GO:0006979|GO:0020037
Gso17g2222 492 PANTHER CATALASE 2 492 IPR018028 GO:0004096|GO:0006979|GO:0020037
Gso17g2222 492 ProSitePatterns Catalase proximal active site signature. 54 70 IPR024708 GO:0004096
Gso17g2222 492 SUPERFAMILY Heme-dependent catalase-like 13 489 IPR020835 GO:0020037
Gso17g2222 492 Pfam Catalase-related immune-responsive 423 486 IPR010582 -
Gso17g2222 492 ProSitePatterns Catalase proximal heme-ligand signature. 344 352 IPR002226 GO:0020037
Gso17g2222 492 PIRSF Catalase_clade1-3 6 491 IPR024711 GO:0004096|GO:0006979|GO:0020037
Gso17g2222 492 Pfam Catalase 18 398 IPR011614 GO:0004096|GO:0020037
Gso17g2222 492 PANTHER CATALASE 2 492 - -
Gso17g2222 492 SMART Catalase_2 18 401 IPR011614 GO:0004096|GO:0020037
Gso17g2222 492 PRINTS Catalase signature 31 54 IPR018028 GO:0004096|GO:0006979|GO:0020037
Gso17g2222 492 PRINTS Catalase signature 94 112 IPR018028 GO:0004096|GO:0006979|GO:0020037
Gso17g2222 492 PRINTS Catalase signature 115 132 IPR018028 GO:0004096|GO:0006979|GO:0020037
Gso17g2222 492 PRINTS Catalase signature 134 152 IPR018028 GO:0004096|GO:0006979|GO:0020037
Gso17g2222 492 PRINTS Catalase signature 299 326 IPR018028 GO:0004096|GO:0006979|GO:0020037
Gso17g2222 492 PRINTS Catalase signature 331 357 IPR018028 GO:0004096|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2222 Gso-Chr17 41904906 41908226 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2222 K03781 - gmx:547510 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1894 14 51391502 51394804 Gso17g2222 17 41904906 41908226 GST