Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2219 ATGGGCTATTGGAGCAGTGAGGAACGTGATCAAACCACTCAACAAAGTGATCTCGGTGCAGTTTTGCGTGATGGAAAAGAAATACTTCTTCAGGCATTCAACTGGGAGTCTAACAAATACAACTGGTGGAATAATTTAGAAGGCAAAGTTCCTGACATAGCTAAAGCTGGATTTACTTCAGTCTGGTTGCCGCCACCAACTCACTCCTTCTCACCTGAAGTTCTCTCATTTGTATACATGTGTTGTTTATTTCAGGGTAATCGAAGCACAGGAGATATTTTCCATGGATTTCCCAATATCGACCATACTAAAGATTTTGTGAGAAAGGATATCATAGGATGGCTCCGTTGGTTGCGCCATGAGGTGGGCTTCCATGATTTTCGATTTGGTTTTGTAAAGGGGTTTTCACCAAAATATGTTAAAGAATATATTGAAGGAGCAAAACCATTATTTTGTGTTGGGGAGTACTGGCATTCTTGCAACTACAAGGGTTCTACCTTGGACTATAACCAAGATAGCCATAGACAGCGACGACTAATCAATTGGATTGATGGCACTGGACAACTTTCAACTGCATTTGACTTTACAACAAAAGGAATTCTCCAGAAGCTGTTAAAGGAGACTTCTGGCGTCTGTGTGATCCTCAAGGGAAGCCCCCAGGTGTGA 666 0.4189 MGYWSSEERDQTTQQSDLGAVLRDGKEILLQAFNWESNKYNWWNNLEGKVPDIAKAGFTSVWLPPPTHSFSPEVLSFVYMCCLFQGNRSTGDIFHGFPNIDHTKDFVRKDIIGWLRWLRHEVGFHDFRFGFVKGFSPKYVKEYIEGAKPLFCVGEYWHSCNYKGSTLDYNQDSHRQRRLINWIDGTGQLSTAFDFTTKGILQKLLKETSGVCVILKGSPQV* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2219 221 PANTHER ALPHA-AMYLASE 2-RELATED 22 74 - -
Gso17g2219 221 PANTHER ALPHA-AMYLASE 2-RELATED 81 207 - -
Gso17g2219 221 PANTHER ALPHA-AMYLASE 22 74 - -
Gso17g2219 221 PANTHER ALPHA-AMYLASE 81 207 - -
Gso17g2219 221 SUPERFAMILY (Trans)glycosidases 35 205 IPR017853 -
Gso17g2219 221 Gene3D Glycosidases 78 219 - -
Gso17g2219 221 Gene3D Glycosidases 12 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2219 Gso-Chr17 41854659 41859259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2219 1 73 Glycoside Hydrolase AT1G76130 61.644 1.96e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2219 K01176 - gmx:100793671 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1885 14 51281948 51287642 Gso17g2219 17 41854659 41859259 GST