Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2209 ATGGCAGCTATTGCTACAGTTATTATGCTCATAACTATGTCCCTGGCTTCTCTTGTGAGTGCACTAAATGTAAATTACTATGAAAATACGTGCCCCCATAATGTAGATTCCATTGTAGCTGCTGCTGTTCACAAAGCAACCATGAATGACAGAACTGTCCCAGCTGCTCTCCTTCGGATGCATTTTCATGATTGCTTCATAAGGGGTTGTGATGCCTCTGTACTTCTGGAATCAAAAGGTAAGAATAAAGCAGAAAAGGATGGACCTCCTAACATTTCTTTGCATGCATTCTATGTCATTGACAATGCTAAGAAAGCAGTGGAAGCCGTTTTCCCCGGGATCGTATCTTGTGCTGATATTTTGGCTCTTGCTGCTAGGGATGCTGTTGCCCTTTCCGGAGGACCCACTTGGGATGTGACAAAAGGAAGAAAGGATGGAAGAATATCAAAGGCCACTGAAACCAGACAACTGCCGGCTCCCACCTTCAACATCTCCCAATTACAACAAAGCTTCTTCCAAAGAGGCCTTTCCTTGGAAGATCTTGTGGCCCTCTCAGGTACTATTGAAAATTTTAAATTACGAATTCAATTGCAAAAGATCTAA 603 0.4279 MAAIATVIMLITMSLASLVSALNVNYYENTCPHNVDSIVAAAVHKATMNDRTVPAALLRMHFHDCFIRGCDASVLLESKGKNKAEKDGPPNISLHAFYVIDNAKKAVEAVFPGIVSCADILALAARDAVALSGGPTWDVTKGRKDGRISKATETRQLPAPTFNISQLQQSFFQRGLSLEDLVALSGTIENFKLRIQLQKI* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2209 200 SUPERFAMILY Heme-dependent peroxidases 22 186 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso17g2209 200 Pfam Peroxidase 40 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g2209 200 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g2209 200 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g2209 200 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g2209 200 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2209 200 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2209 200 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2209 200 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2209 200 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2209 200 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2209 200 PANTHER PEROXIDASE 25-RELATED 6 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2209 200 ProSiteProfiles Plant heme peroxidase family profile. 21 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g2209 200 PANTHER PEROXIDASE 64 6 187 - -
Gso17g2209 200 Gene3D - 22 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2209 Gso-Chr17 41800210 41801298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2209 2 186 Peroxidase AT5G42180 74.054 2.22e-97 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2209 K00430 - gmx:106796602 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1872 14 51149185 51151429 Gso17g2209 17 41800210 41801298 GST