Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2203 ATGAAGCTCCCAGCTTTTTCTTCTTCTCCTCCTCCAGTACATTATTGTTTTCTGCCTTCAACGACTTTTAAGTCACTTGTCCGTTTGACAGTACTATTACTAGTTGTTTCCAGCAACAAAACAAAGGGTGCTGTGGAACTTCCACCAAATGTCTCGGTTCCAGCAGTGTTGGTATTTGGAGATTCGATCATGGACACTGGCAACAACAACAACAACTTGATAACATCAGCTCGGTGCAACTTCTCACCATATGGCCAAGATTTTATGGGAGGGATCCCTACTGGCCGATTTTGCAATGGAAAGGTTCCATCAGACATTCTAGTTGAAGAATTAGGCATAAAAGAGTTTCTACCCGCATACTTGGATCCAAATCTGCAGCTTAGTGAATTAGCCACCGGTGTGTGCTTTGCATCGGGTGGTTCCGGATACGATCCTTTGACATCACAAACCGCGACAGCTATACCATTATCCGGTCAACTAGACATGTTCAAAGAATACATAGTGAAGCTAAAAGGACACGTTGGAGAGGACAGAACAAACTTTATCCTAGCCAACGCTCTTTTCTTTGTCGTTTTAGGCAGCAATGACATTTCCAACACATACTTTTTGAGCCATCTCAGAGAACTGCAGTATGATGTTCCCACTTACTCTGATTTCATGCTTAACTTAGCTTCTAATTTCTTCAAGGAAATATATCAACTAGGTGCGCGGAGGATTGCAGTACTCAGTGCACCGCCAGTTGGGTGTGTACCGTTTCACAGAACATTGAGTGGTGGAATAGCAAGGAAATGTGTACAAAAGTACAACAATGCAGTGGTGTTATTTAACGACAAATTGTTGAAGGAGATAAATTCCCTTAATCAGAACCTTCCAAACAGCAGGATTGTTTACTTAGATGTGTACAACCCTTTGCTTGATATCATTGTAAACCACCAAAAATATGGTTACAAAGTCGGGGACAGAGGGTGTTGTGGCACAGGCAATCTAGAGGTTGCATTGACATGCAACCATTTGGATGCCACATGTTCTAACGTTTTGGATTATGTGTTTTGGGATGGTTTTCACCCTAGTGAAAGCGTTTACAAAAAGCTTGTGCCCGCTGTTCTACAGAAATATATATACCAGTTTGCCTGA 1134 0.4206 MKLPAFSSSPPPVHYCFLPSTTFKSLVRLTVLLLVVSSNKTKGAVELPPNVSVPAVLVFGDSIMDTGNNNNNLITSARCNFSPYGQDFMGGIPTGRFCNGKVPSDILVEELGIKEFLPAYLDPNLQLSELATGVCFASGGSGYDPLTSQTATAIPLSGQLDMFKEYIVKLKGHVGEDRTNFILANALFFVVLGSNDISNTYFLSHLRELQYDVPTYSDFMLNLASNFFKEIYQLGARRIAVLSAPPVGCVPFHRTLSGGIARKCVQKYNNAVVLFNDKLLKEINSLNQNLPNSRIVYLDVYNPLLDIIVNHQKYGYKVGDRGCCGTGNLEVALTCNHLDATCSNVLDYVFWDGFHPSESVYKKLVPAVLQKYIYQFA* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2203 377 Pfam GDSL-like Lipase/Acylhydrolase 56 364 IPR001087 GO:0016788
Gso17g2203 377 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 56 67 IPR008265 GO:0006629|GO:0016298
Gso17g2203 377 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 19 375 - -
Gso17g2203 377 SUPERFAMILY SGNH hydrolase 186 370 - -
Gso17g2203 377 PANTHER GDSL ESTERASE/LIPASE EXL3 19 375 - -
Gso17g2203 377 CDD SGNH_plant_lipase_like 54 372 IPR035669 -
Gso17g2203 377 Gene3D SGNH hydrolase 47 372 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2203 Gso-Chr17 41743592 41748021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2203 50 370 Pollen Coat Proteome AT1G75910 39.506 7.00e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2203 - - gmx:100777186 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1866 14 51091499 51095203 Gso17g2203 17 41743592 41748021 GST
Gso17g2203 17 41743592 41748021 Gso6g0181 6 1697462 1716145 PCT