Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2202 ATGGGTCTTTTTATGAAGCTCCCTTTTCCTCCTCATCTTGCAGCTTCCTCACTGCTCCATTTCATATTATTATTATTATTATTGATTTTTGATATTGTGTGTAAAACAAGGGCAGTTGTGAAAATTCCACCAAATGTTTCAGTTCCAGCAGTGTTGGTGTTTGGAGATTCGATCGTGGACACTGGCAACAACAACAACAACTTGGGAACAACGGCTCGGTGCAATTACCCACCATATGGTAAAGATTTTAAGGGAGGCAAACCAACTGGTCGATTTAGCAACGGAAAGGTTCCATCTGACTTTATAGCTGAAGAATTGGGCATTAAAGAGTATGTACCAGCATACTTGGATCCACATCTCCAACCTGGTGAATTGGCCACTGGTGTGTGCTTTGCATCCGGTGGTGCAGGATATGATCCTTTTACATCGCAATCAGCGTCGGCTATACCTTTATCGGGTCAACTAGACTTGTTCAAAGAATACATAGGCAAACTACGAGGAGTGGTTGGAGAAGACAGAGCAAAGTTCATCTTAGGCAACAGTCTTTATGTTGTGGTATTTGGCAGCAATGACATTTCCAATACTTACTTTTTGACCCGTGTTAGACAACTGCAATATGATTTTCCTGCATACGCTGATTTTTTGCTCAGCTCAGCTTCTAATTTCTTCAAGGAATTATATGGATTAGGGGCACGGAGGATCGCAGTGTTCAGTGCACCACCACTTGGGTGTTTGCCATCTCAGAGAACGCTGGCAGGAGGTTTAGAAAGAAAAATTGTAGTCAATATTAACAACGCAGTACAGATATATAACAGCAAATTGTCGAAGGAGCTGGATTCTCTCAATCACAACCTTCAAGATAGCAGGATAGTTTACATTGATGTTTACAACCCTCTCTTTGACATCATTGTAAACTACAATAAATATGGCTATAAAGTCGGAGACAAGGGGTGCTGTGGCACGGGCACAATAGAGGTTGTGTTATTATGCAACCGTTTCACTCCATTGTGCCCCAACGATTTGGAGTATGTGTTTTGGGACAGTTTTCATCCTACTGAAAGCGTTTATAAAAGGCTCATAGCTTCTCTTATTGGAAAATATTTGGATAAATTCTTGTGA 1119 0.4111 MGLFMKLPFPPHLAASSLLHFILLLLLLIFDIVCKTRAVVKIPPNVSVPAVLVFGDSIVDTGNNNNNLGTTARCNYPPYGKDFKGGKPTGRFSNGKVPSDFIAEELGIKEYVPAYLDPHLQPGELATGVCFASGGAGYDPFTSQSASAIPLSGQLDLFKEYIGKLRGVVGEDRAKFILGNSLYVVVFGSNDISNTYFLTRVRQLQYDFPAYADFLLSSASNFFKELYGLGARRIAVFSAPPLGCLPSQRTLAGGLERKIVVNINNAVQIYNSKLSKELDSLNHNLQDSRIVYIDVYNPLFDIIVNYNKYGYKVGDKGCCGTGTIEVVLLCNRFTPLCPNDLEYVFWDSFHPTESVYKRLIASLIGKYLDKFL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2202 372 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 51 62 IPR008265 GO:0006629|GO:0016298
Gso17g2202 372 CDD SGNH_plant_lipase_like 49 367 IPR035669 -
Gso17g2202 372 PANTHER GDSL ESTERASE/LIPASE EXL3 31 365 - -
Gso17g2202 372 SUPERFAMILY SGNH hydrolase 51 370 - -
Gso17g2202 372 Gene3D SGNH hydrolase 41 369 IPR036514 -
Gso17g2202 372 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 31 365 - -
Gso17g2202 372 Pfam GDSL-like Lipase/Acylhydrolase 51 359 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2202 Gso-Chr17 41735595 41740645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2202 22 364 Pollen Coat Proteome AT1G75910 40.751 3.25e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2202 - - gmx:100776651 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1865 14 51085732 51090690 Gso17g2202 17 41735595 41740645 GST
Gso6g0180 6 1690489 1692976 Gso17g2202 17 41735595 41740645 PCT