Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2181 ATGATAGGATCCTTTCTGACCTGGGCCCTTGTGATGGTTTTTGGCTATGCTTATCCAGCTTATGAATGCTATAAAGTGGTTGAAAAGAATAAGCCGGAAATTGAACAACTTCGCTTTTGGTGCCAGTATTGGATTTTGGTGGCTGTTTTGACAGTATGTGAGAGAGTTGGTGATACTTTTATATCATGGGTCCCAATGTACAGTGAAGCTAAGTTGGCATTTTTCATATTTCTGTGGTATCCTAAAACTAAGGGAACAACATATGTGTATGACTCCTTCTTCAGACCATATGTTGCGAAACATGAGACAGAAATTGATCGCAACTTATTGGAACTAAGGACAAGGGCAGGGGATATTGCAGTTTTGTATTGGCAAAGAGCTTTCAGTTATGGTCAGACTAGAATATATGACATTTTGCAATTTGTTGCTGCACAATCGACTCCAGCTCCTCGACCTGCTCAGCCACGACCGGGTGTGAGGGGGGTTCGTCAACAGGCACCTGCAAAACCAGCTGCTGCAGCAGAACCACAAGTTGAGGAACCTCCATCTCCTACCTCTAGCACATCTTCAAGTCAGCTCCAGAGGGAGGTAGAAGAGGAATTGGGTTCTTCTCCACAAGTTCCTAAAGCACCCACATCTGTAACAGGTTTAAGTAACCAGAAAACTCCTGTAGCAGGTGTAAGTACTCAGAAGTCTGCTGGAGCAAGTTTAAGTACTCAGAAGTCTACTGGAGCAAGTTTGAGTACTCAGAAGTCTAATGTTGCACCTGAAACAACCAACCAATCTGCACCAGCAGAGGCAGAGCCAAAACAAATTGAAGCAGCTCCATCTTCAGCAAAAGAAAATGGGAACTCTCCTCCTACTTCTACAAAAGAGACCTTAATGGAAGAAAGCATTCGAGTTACACGTGGTAGACTAAGAAAAACCCGATCAGCAGGAACTCGCTAG 948 0.4388 MIGSFLTWALVMVFGYAYPAYECYKVVEKNKPEIEQLRFWCQYWILVAVLTVCERVGDTFISWVPMYSEAKLAFFIFLWYPKTKGTTYVYDSFFRPYVAKHETEIDRNLLELRTRAGDIAVLYWQRAFSYGQTRIYDILQFVAAQSTPAPRPAQPRPGVRGVRQQAPAKPAAAAEPQVEEPPSPTSSTSSSQLQREVEEELGSSPQVPKAPTSVTGLSNQKTPVAGVSTQKSAGASLSTQKSTGASLSTQKSNVAPETTNQSAPAEAEPKQIEAAPSSAKENGNSPPTSTKETLMEESIRVTRGRLRKTRSAGTR* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2181 315 PANTHER HVA22-LIKE PROTEIN 6 312 - -
Gso17g2181 315 PANTHER HVA22-LIKE PROTEINS 6 312 IPR004345 -
Gso17g2181 315 MobiDBLite consensus disorder prediction 147 315 - -
Gso17g2181 315 Pfam TB2/DP1, HVA22 family 19 97 IPR004345 -
Gso17g2181 315 MobiDBLite consensus disorder prediction 180 199 - -
Gso17g2181 315 MobiDBLite consensus disorder prediction 277 295 - -
Gso17g2181 315 MobiDBLite consensus disorder prediction 206 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2181 Gso-Chr17 41516717 41519505 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2181 K17338 - gmx:100816203 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1843 14 50876229 50879249 Gso17g2181 17 41516717 41519505 GST
Gso17g2181 17 41516717 41519505 Gso4g0220 4 1972634 1975423 PCT
Gso17g2181 17 41516717 41519505 Gso6g0199 6 1871488 1874432 PCT
Gso4g0220 4 1972634 1975423 Gso17g2181 17 41516717 41519505 PCT
Gso6g0199 6 1871488 1874432 Gso17g2181 17 41516717 41519505 PCT