Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2169 ATGGGTATCCTTGTTCTTCTTTCTCTATTGTCTATAGTCATCTCCATTGTTCTCTTCATTACCCACACACACAAAAGAAACAACACTCCAAGAGGACCACCAGGTCCTCCACCTCTTCCTCTCATCGGCAACCTTCACCAACTCCACAACTCATCCCCACATCTCTGCCTATGGCAACTCGCCAAACTCCACGGTCCTCTCATGTCGTTTCGCCTCGGCGCCGTGCAAACCGTCGTGGTTTCATCGGCCAGAATCGCCGAACAAATCTTGAAAACCCACGACCTCAACTTCGCTTCCAGGCCTCTCTTCGTGGGCCCGAGAAAGCTCTCTTACGACGGGTTGGACATGGGCTTCGCACCGTACGGCCCGTACTGGAGAGAAATGAAGAAACTCTGCATCGTTCACCTCTTCAGCGCGCAACGCGTTCGGTCCTTTCGACCAATTCGAGAGAACGAGGTTGCAAAAATGGTTCGGAAACTGTCGGAACACGAAGCTTCGGGTACTGTCGTGAACTTGACCGAAACTTTGATGTCTTTCACGAACTCTTTGATATGCAGAATCGCGTTGGGGAAAAGTTACGGTTGTGAGTACGAGGAAGTAGTTGTTGATGAGGTACTGGGAAACCGGAGGAGCAGGTTGCAGGTTCTGCTCAACGAGGCTCAAGCGTTGCTTTCGGAGTTTTTCTTTTCGGATTATTTTCCGCCTATAGGAAAGTGGGTTGATAGAGTGACGGGAATTCTATCGCGGCTTGATAAAACGTTCAAGGAGTTGGACGCGTGCTACGAACGATTCATCTATGATCACATGGATTCGGCAAAGAGTGGTAAAAAAGATAATGACAACAAAGAAGTCAAAGATATTATTGATATTCTTCTCCAGCTACTTGATGATCGTTCCTTCACCTTTGATCTCACTCTCGACCACATAAAAGCCGTGCTCATGAACATCTTTATAGCAGGAACAGACCCGAGTTCCGCGACAATAGTTTGGGCAATGAATGCACTGTTGAAGAATCCCAATGTGATGAGCAAGGTTCAAGGAGAAGTGAGAAATCTATTCGGTGACAAAGATTTCATAAACGAAGATGATGTCGAAAGCCTTCCTTATCTCAAAGCAGTGGTGAAGGAGACATTAAGATTATTCCCACCTTCACCACTACTTTTGCCAAGGGTAACAATGGAAACATGCAACATAGAAGGGTACGAAATTCAAGCCAAAACTATAGTGCATGTTAATGCATGGGCCATAGCAAGGGACCCTGAGAATTGGGAAGAGCCTGAGAAATTTTTCCCCGAAAGGTTCCTTGAGAGTTCGATGGAGTTAAAGGGGAATGATGAGTTTAAGGTGATCCCGTTTGGTTCTGGAAGGAGAATGTGTCCTGCGAAGCACATGGGAATTATGAATGTTGAGCTTTCTCTTGCTAATCTCATTCACACGTTTGATTGGGAAGTGGCTAAAGGGTTCGACAAGGAAGAAATGTTGGACACGCAAATGAAACCAGGAATAACGATGCACAAGAAAAGTGATCTTTACCTAGTGGCAAAGAAACCGACAACGTAG 1560 0.4609 MGILVLLSLLSIVISIVLFITHTHKRNNTPRGPPGPPPLPLIGNLHQLHNSSPHLCLWQLAKLHGPLMSFRLGAVQTVVVSSARIAEQILKTHDLNFASRPLFVGPRKLSYDGLDMGFAPYGPYWREMKKLCIVHLFSAQRVRSFRPIRENEVAKMVRKLSEHEASGTVVNLTETLMSFTNSLICRIALGKSYGCEYEEVVVDEVLGNRRSRLQVLLNEAQALLSEFFFSDYFPPIGKWVDRVTGILSRLDKTFKELDACYERFIYDHMDSAKSGKKDNDNKEVKDIIDILLQLLDDRSFTFDLTLDHIKAVLMNIFIAGTDPSSATIVWAMNALLKNPNVMSKVQGEVRNLFGDKDFINEDDVESLPYLKAVVKETLRLFPPSPLLLPRVTMETCNIEGYEIQAKTIVHVNAWAIARDPENWEEPEKFFPERFLESSMELKGNDEFKVIPFGSGRRMCPAKHMGIMNVELSLANLIHTFDWEVAKGFDKEEMLDTQMKPGITMHKKSDLYLVAKKPTT* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2169 519 Pfam Cytochrome P450 33 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 SUPERFAMILY Cytochrome P450 33 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 Gene3D Cytochrome P450 22 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 PANTHER CYTOCHROME P450 83B1 9 516 - -
Gso17g2169 519 PANTHER CYTOCHROME P450 71B11-RELATED 9 516 - -
Gso17g2169 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Gso17g2169 519 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2169 519 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2169 Gso-Chr17 41344495 41346811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2169 1 516 Cytochrome P450 AT4G31500 43.160 4.82e-151 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2169 - - gmx:606704 996.497