Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2147 ATGCATTTCATCAAAGTCACTCTTTTTGCAATGATAGCTTTTTTCCTCTCAGTGAAACTCTCCCTGGCTCACCCTGGCTTCCATTTTGGTTGGGGTGATCATCATAGGGGAATATCTTTTGGTCTTTCACCTCAATTCTATCAATTTTCATGCCCTCAAGCTAATGACATTGTCATGTCTGTGTTGGAGAAGGCCATTGCAAAGGACATGAGAATTGCTGCTTCTCTACTTAGACTTCACTTTCACGATTGCTTTGTGCAGGGCTGTGATGCATCAATTTTGTTGGAAGATAGCGCAAGAATAGTGAGTGAAAAAAATTCTGGACCTAACAAAAATTCTGTCCGAGGCTTCGAAGTGATTGATAAGATAAAGTCTAAGTTGGAAGAAGCATGTCCTCAGACTGTGTCCTGTGCAGACATTCTTGCCCTTGCTGCCAGGGGCTCCACTGTTCTTAGTGGAGGACCTAATTGGGAACTCCCATTAGGGAGAAGAGACTCAAAAACAGCAAGCTTAAGTGACTCAAACAAAAACATTCCCCCACCAAATGCCACCATTGAAAATCTTGTGACATTTTTCAAGCGTCATGGCCTTGATGAAGTGGACCTCGTTGCCCTCTCAGGTGCACATACCATTGGGGTGGCAAGATGTGTCACATTCAAGCAGAGACTATACAACCAAAAAGGAAACAACCAACCGGATGAGAATCTAGAAAAATCCTTTTACTTTGATTTGAAGACGATGTGCCCAAAATCAGGTGGTGACAACTTCATTTCTCCCTTGGACTTTGGCTCCCCAAGAATGTTTGATAATACCTATTTCAAACTCATACTTCGGGGTAAAGGACTGCTTAATTCAGATGAAGTGCTTCTTATGGGAAATGTTAAGGAAACTCAGGAATTGGTCAAGAAATATGCACAAGATGAGAGCCTTTTTTTTGAGCAATTTGCCATGTCCATGATCAAGATGGGGAACCTTCGTCCTCTTACTGGATTTAATGGAGAAGTTAGGAAGAATTGTCGCCGTGTTAATTAA 1032 0.4196 MHFIKVTLFAMIAFFLSVKLSLAHPGFHFGWGDHHRGISFGLSPQFYQFSCPQANDIVMSVLEKAIAKDMRIAASLLRLHFHDCFVQGCDASILLEDSARIVSEKNSGPNKNSVRGFEVIDKIKSKLEEACPQTVSCADILALAARGSTVLSGGPNWELPLGRRDSKTASLSDSNKNIPPPNATIENLVTFFKRHGLDEVDLVALSGAHTIGVARCVTFKQRLYNQKGNNQPDENLEKSFYFDLKTMCPKSGGDNFISPLDFGSPRMFDNTYFKLILRGKGLLNSDEVLLMGNVKETQELVKKYAQDESLFFEQFAMSMIKMGNLRPLTGFNGEVRKNCRRVN* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2147 343 Gene3D Peroxidase, domain 2 179 323 - -
Gso17g2147 343 SUPERFAMILY Heme-dependent peroxidases 41 343 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 Pfam Peroxidase 60 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PANTHER PEROXIDASE 72-RELATED 23 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 Gene3D - 46 343 - -
Gso17g2147 343 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PRINTS Haem peroxidase superfamily signature 261 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Gso17g2147 343 CDD secretory_peroxidase 41 342 IPR033905 GO:0004601|GO:0042744
Gso17g2147 343 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Gso17g2147 343 PANTHER PEROXIDASE 23 342 - -
Gso17g2147 343 ProSiteProfiles Plant heme peroxidase family profile. 41 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PRINTS Plant peroxidase signature 259 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PRINTS Plant peroxidase signature 275 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g2147 343 PRINTS Plant peroxidase signature 317 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2147 Gso-Chr17 41121628 41123802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2147 6 343 Peroxidase AT1G44970 72.141 1.17e-178 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2147 K00430 - gmx:102660391 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0608 14 5955600 5957976 Gso17g2147 17 41121628 41123802 GST