Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2114 ATGTTTCATCGCTGGAGCAATTCTCATCAACAAGATCAGGGAAGCAGTGAGCTTTATACTGAATCCAAGATTAAGGAGCTGAAGGGTGCTATTGGACCCTTATCTGGACGCAGTTTGATGTATTGCACTGATTCATGTTTTAAGAGATATTTGGAAGCTCGAAACTGGAACGTAGACAAGTCCAAGAAGATGTTGGAGGAGACACTAAGGTGGAGATCAACCTATAAGCCAGAGGAAATTCGCTGGCATGAGGTTGCAATAGAAGGAGAGACTGGGAAATTGTATAGAGCAAATTTTCATGATAGACAAGGAAGGAATGTTCTTATTTTGAGGCCAGGAATGCAGAACACTACTTCAATGGAGAATCAGCTGCGGCATCTTGTGTATCTTTTGGAAAATGCCATGCTTAACCTTCCACCGGGTCAAGAACAAATGTCATGGTTGATAGACTTCACTGGATGGTCAATAACCAACAATGTGCCCCTTAAATTAGCCAGAGAGACCATCAACATTTTGCAGAACCATTACCCTGAGAGGCTTGCCATTGCATTTCTTTACAACCCCCCTCGAGTTTTTGAAGCTTTTTGGAAGATAGTCAAGTACTTCTTGGACAACAAGACATTTCAGAAGGTGAAGTTTGTCTACCCGAAAAATAAAGATAGTGTGGAGCTTATGAAGTCCTATTTTGATGAGGAAAATCTTCCCAAAGAACTAGGTGGAAAAAGCATAATGAGTTATAACCATGACGAGTTCTCCAGATTAATGGTTCAGGATGATTTGAAATGTGCAGCATTTTGGGGATCTGATGGGAAGCTCTCAAACCACATTGCTAACGGGCAATCCCCAGCAGTTTGCAATGAAACCCCACCCGAGGCATGTTAA 882 0.4195 MFHRWSNSHQQDQGSSELYTESKIKELKGAIGPLSGRSLMYCTDSCFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAIEGETGKLYRANFHDRQGRNVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPKNKDSVELMKSYFDEENLPKELGGKSIMSYNHDEFSRLMVQDDLKCAAFWGSDGKLSNHIANGQSPAVCNETPPEAC* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2114 293 Pfam CRAL/TRIO, N-terminal domain 26 67 IPR011074 -
Gso17g2114 293 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 82 246 IPR001251 -
Gso17g2114 293 Gene3D - 4 268 IPR036865 -
Gso17g2114 293 Pfam CRAL/TRIO domain 91 240 IPR001251 -
Gso17g2114 293 SMART CRAL_TRIO_N_2 43 68 IPR011074 -
Gso17g2114 293 CDD SEC14 100 241 IPR001251 -
Gso17g2114 293 PANTHER GH16843P 7 279 - -
Gso17g2114 293 SUPERFAMILY CRAL/TRIO domain 82 253 IPR036865 -
Gso17g2114 293 PANTHER CELLULAR RETINALDEHYDE BINDING/ALPHA-TOCOPHEROL TRANSPORT-RELATED 7 279 - -
Gso17g2114 293 SUPERFAMILY CRAL/TRIO N-terminal domain 19 84 IPR036273 -
Gso17g2114 293 SMART sec14_4 88 243 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2114 Gso-Chr17 40860817 40863120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2114 49 235 Acyl Lipid Metabolism Gene Families AT5G47730 27.094 3.43e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2114 - - gmx:100790867 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0640 14 6286696 6292776 Gso17g2114 17 40860817 40863120 GST