Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2108 ATGCACCATCTTCTACTCTTTGTGATCCTTGTTGTGCTTCTAGTGTTTCTTGCAAGAGTTGCATATTCAATCATTTGGGTGCCATGGGTCATCGCACGTCACTTTCGTGAACAAGGCATAAGGGGTCCTTCCTACCGTCCGATCAAAGGGAACACCGATGAGATCAGAGGCATGTACGCGGAAGTTCAATCCAGGCCAATGGCATTGTGCCACGACATCCTCGAGCGTGTGTGTCCATTCTATCACAAATGGTCACGCATGTATGGGAAAACTGTTCTGTATTGGCACGGGTCGGATCCCATGCTGGTATTATCCGACCCGGATATGATAAAGGAGATCCTTTTGAAAACGGGTGATTGGTTTGAGAGGATAGATCCGAATCCGTCGGCGAAACGGTTCTTTGGAGAAGGAATATTGGTGTTGAAACGAGACAAATGGGCAGTGCATAGAGCAATAGCTAATCAGGCTTTTAAAATAGAGCGGGTCAAGTGTTGGATTCCACAAATTATAGATAGCACAAAAACAATGTTTTACAAGTGGGAAGATGAGAACAAAGGTGTTGATGAATTTGAGATTGAAGTGAGCAAAGATCTCCATGACCTTACATCTGATATTATATCTAAAGTCGCTTTCGGAAGTAACTATGAAGAAGGGAAGGGGATTTTTGATTTACTAGAACAACATTATCATCTTGTCTCCCTTGCTAGCAGAAGTGTCTATCTTCCTGGATTCAGGTTTTTACCTACGAAGAAGAACCGAGAAAGAAAGAGATTAGAGAAGAAAACCAGTGAATCAATTCAAGTGTTGATTAATGACAACTACAAAGCAGAACAAAATTCAGAGAACTTGCTTTCTTTGTTGATGTCTTCTCACAAATTTATCAACAATGAGACACAAAAGTTAAGTATGGTCGAGATAGTGGATGATTGTAAAAACTTTTATATGGCAGGAAAGGAAACAAGTGCAAATTCATTAAGCTGGGCACTCCTCCTTTTAGGGATAAATCAAGAATGGCAAAGCAAGGCACGCGAGGAAGTACTAAGTGTTTTGGGACCTAATACTTCTCCAACTTCAGAAGCATTAAATGACCTAAAACTTGTGAACTTGATACTTCAAGAAACACTTCGACTCTACCCTAATCCAGGGACATTGGTAAGACAAGCAAGTAAAAGAGTTCAATTAAGGAACATTGACATTCCTGTTGGTACACAACTATATTTATCTATCACAACAGCTCATCATGATCCAAAGTTATGGGGAGAAGATGCTCTTGAATTCAATCCTATGAGATTTGTCGAGCCTCGGAAGCATTTAGCTCCATATTTTCCCTTCGGATTAGGCCCTAACTATTGTGTGGGTCAAAATTTAGCTTTGTTTGAAATGAAAATTGTACTTGTCATGGTCTTACAGAGGTATTCTTTTGTTGTATCACCAACATATGCTCACGGACCAATGTTGTTGATGACTGTGACACCTCAATATGGCATGCAAATTGTCTTTAGGAGATTATGA 1512 0.4021 MHHLLLFVILVVLLVFLARVAYSIIWVPWVIARHFREQGIRGPSYRPIKGNTDEIRGMYAEVQSRPMALCHDILERVCPFYHKWSRMYGKTVLYWHGSDPMLVLSDPDMIKEILLKTGDWFERIDPNPSAKRFFGEGILVLKRDKWAVHRAIANQAFKIERVKCWIPQIIDSTKTMFYKWEDENKGVDEFEIEVSKDLHDLTSDIISKVAFGSNYEEGKGIFDLLEQHYHLVSLASRSVYLPGFRFLPTKKNRERKRLEKKTSESIQVLINDNYKAEQNSENLLSLLMSSHKFINNETQKLSMVEIVDDCKNFYMAGKETSANSLSWALLLLGINQEWQSKAREEVLSVLGPNTSPTSEALNDLKLVNLILQETLRLYPNPGTLVRQASKRVQLRNIDIPVGTQLYLSITTAHHDPKLWGEDALEFNPMRFVEPRKHLAPYFPFGLGPNYCVGQNLALFEMKIVLVMVLQRYSFVVSPTYAHGPMLLMTVTPQYGMQIVFRRL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2108 503 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 498 - -
Gso17g2108 503 PANTHER CYTOCHROME P450 FAMILY 709 PROTEIN 2 498 - -
Gso17g2108 503 SUPERFAMILY Cytochrome P450 43 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2108 503 Pfam Cytochrome P450 80 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2108 503 Gene3D Cytochrome P450 29 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2108 503 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2108 503 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2108 503 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2108 503 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2108 503 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2108 503 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2108 503 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2108 503 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2108 503 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2108 503 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g2108 503 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2108 Gso-Chr17 40804991 40807880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2108 22 503 Cytochrome P450 AT1G75130 49.485 5.28e-175 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2108 - - gmx:100789281 975.311