Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2041 ATGCTCATAATAAAGATTCGGAGTTGGCTACTAGAGCCAAAGGTATGGAGTTTTGTGTGCTTTGTTTCATCTGTTGTTGGGTTGCTCTGTTACGCTCTCAGCACCTCTTTCAACCATTTATTTGGAAAGTGGACTTGGTGGAAGACATTACTTTATATTGTCTTTAGTTTCATCGTGTGTCTTGCGGTCTTATTCGCAAAGGCATGGGAGCGCTCCACCTCTACCTGGCTGGAAGCTCATATGGCCTTTTTGATTTTGTTCTTCACTTCTGTATACTCCTTTTTCTTTGATAAAGAAGTGAAAGGAAAACCTGATGCTTATAGCCTATTTTCCTGTGCTGCATTTGCTATCATGTCTCTGAGTATGTCAAGACTGAGTCACTTTGGATTTGAGGTTGATCTCCTATATTTTTTCAGCGGAGTTCTTACGATACAACTCATGAAAATAAAAATATGGTTAGTCGTCGTTGGTGGGAGTTTCAGTTATTCTCTCATCCTTCTTCGTTCTACTTTGGGTGCTTCACCGACGAGAATCGAGTATCGTGGACTACAACTCAGAGATGATCTAGTCATTGAAATTGATTCACAAGGAACCAGTCACAGTACATCTCAGTTGCATCCTGATGTTATGATTATCACGCAACAAGACGCTCATGTCCCTCTTGAATTCCCAGTCAATTCACTTTCACAACAAGGCAACAGTTTCAGTGATAACAACATCATGGAACGGTTCATGGGTTGTATAGAGGCGCTTAAGAAGGAGAACGAGAACCTTATGGACACAATTTCAAAACATGTCAGCAAATACCTTAAGGCTAATGTTGTCAACGAGGACCAAATTCATGTGTGTGAAATTGATGCCGATGATAACTTGGTGGTGGATGCGTTGTTGTCGTCGGGAATAATCATCAACGACCTCCGTGAAACCGTTAGGCTGATGGTGGCAGCAGGGTTGAAGGTGGAATGCTGCAGAGCGTACCGTAGCTGTCGCAGGAAATTCCTGAGAAAGAGTGTTTCGAATTTTTGGTTGCGAATGCAAGATCTCAACGTGGAGGAGGACATTGACAAGCTGATGATAGAGATTCAGTGTTGGATAAAAGTTCTGAATGTAGCTGTCATGATACTCTTTCCCAATGAAAGGACACTATGCGATCGCGTCTTTGAAGGGTCTATTTCCTCTGTGGAGAAGTACCATGTGTCACTCGGAAATGATGCTCTCTGGGGTGACAAGAGTTTGAACATTTTAATGAACTTGGTATATTTTTCTTATGCTGATAAGGAGCAAGCCACTGTTACTCCTGTAGGTGGAGGGGTTCATCAGATTACCCATTGTGTGTTGGACTATATGAACAGGATAGATTGGCAAAAGCCTTTATCTCTGTTTGTGGAAGTAGACAGGATAATAATAATGAAGCTATTAGAGACTTGTTTGGAAGCCATCTCCAAAATTTACAATAACCCTACTTTGGGTTATATTTTCATCATGAACAATTGGAGGCAAATACAACTAGCAGCAACACAACCCCAATTGAATCCTATTTTTGGCGACTATGGGTTCAAAAAAAGCACAACAAAAGTTCAGCAAAACCTTGAACTCTATCAGAGAAGCTCGTGGAATAAGATTGTGGACATTTTGAAGGTGGACATTGATGAAGTAGAACCTAATGTTGCGGCCGAGGTAATGAAAGACAAGCTCCATTCCTTCAATGAACACTTAGATGAGATATGCAACGTTCAGTCTGCTTGGTTTGTTTTTGATGAACAATTAAGGGAACAACTAATAAAATCCATAGAAAACATGGTGTTGCCAGCATATGGAAACTTCCTCGGGAGGCTTCAGGATTTTCTTGGTAAGCACGCTTATGAGTACATTAAGTATGGAATGTTTGATGTTCAATATCGACTCAACAATAATTTGTTTCTTGTATGGGAGAAAGAACTAGAGTGA 1947 0.4073 MLIIKIRSWLLEPKVWSFVCFVSSVVGLLCYALSTSFNHLFGKWTWWKTLLYIVFSFIVCLAVLFAKAWERSTSTWLEAHMAFLILFFTSVYSFFFDKEVKGKPDAYSLFSCAAFAIMSLSMSRLSHFGFEVDLLYFFSGVLTIQLMKIKIWLVVVGGSFSYSLILLRSTLGASPTRIEYRGLQLRDDLVIEIDSQGTSHSTSQLHPDVMIITQQDAHVPLEFPVNSLSQQGNSFSDNNIMERFMGCIEALKKENENLMDTISKHVSKYLKANVVNEDQIHVCEIDADDNLVVDALLSSGIIINDLRETVRLMVAAGLKVECCRAYRSCRRKFLRKSVSNFWLRMQDLNVEEDIDKLMIEIQCWIKVLNVAVMILFPNERTLCDRVFEGSISSVEKYHVSLGNDALWGDKSLNILMNLVYFSYADKEQATVTPVGGGVHQITHCVLDYMNRIDWQKPLSLFVEVDRIIIMKLLETCLEAISKIYNNPTLGYIFIMNNWRQIQLAATQPQLNPIFGDYGFKKSTTKVQQNLELYQRSSWNKIVDILKVDIDEVEPNVAAEVMKDKLHSFNEHLDEICNVQSAWFVFDEQLREQLIKSIENMVLPAYGNFLGRLQDFLGKHAYEYIKYGMFDVQYRLNNNLFLVWEKELE* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2041 648 Coils Coil 248 268 - -
Gso17g2041 648 PANTHER PROTEIN, PUTATIVE-RELATED 7 642 - -
Gso17g2041 648 Pfam Exo70 exocyst complex subunit 469 636 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso17g2041 648 Gene3D Exocyst complex component Exo70 221 406 - -
Gso17g2041 648 Gene3D Exocyst complex component Exo70 407 643 - -
Gso17g2041 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 642 IPR004140 GO:0000145|GO:0006887
Gso17g2041 648 SUPERFAMILY Cullin repeat-like 297 636 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2041 Gso-Chr17 39929106 39931544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2041 279 636 EXO70 exocyst subunit family AT5G58430 33.710 2.58e-49 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2041 - - gmx:100788390 1281.93