Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2033 ATGGCTGTGAGCGATGGCAATACGATTGCGGTGAAGGAAGCAGCTTCTGCGGGGATTCACAACGTAGAGAAACTCGTGAACATGATTTTGAATCAACACAACGAGGGTGGTTCTGAATTGGAGGCAGTTGCTGACGTGGCGGTGAACCGCTTCAGAGAGGTTATTTCGCTGCTTGAGAAACCAATTACCAGAACCACCGGTCACGCTCGTTTCCGAAGGGCCCCTACAACAGTGCCACCTGTCCCTGTTGTTCAGTTGCAGCAAATGGTGGATGATGATTCCAAACACAAACTGCAGAACAAAACAGAACAAAAACAAAAACAAAGTACCTCTGCTTTTAAGGTTTATTGTCCCCCTCCTTCTCCTCCTCTGCCTCAAAATCAAAATCACCACCACCAACAACAACCTTTCATTCTTCCTCTGCATAAGAATGAAGCAAATGGTTCTACTACCAACTCCCATTTTTCTACGTTATCCGGGGACACTGAGAGTTTGCAACGGTCATGTCTCTCTTCGGGGTTTCAAATTTCTCACGTGTCAATGCAAGGGGGTTCCTTTAAGCGTAAACCTCCACTTTCTACAAATTCTGTGAAGAGGAAGTGCAATTCAACGGGTTTTCCTGATACCAAGTGTGGATCGTCCTCTGTGCAGTGCCATTGCTCCAAGAAAAGGAAATTGAGGTTGAAGAATGTGATTAGAGTGCCGGCAATTAGTTCCAAGACTGCTGATATTCCACCCGATGAGTATTCGTGGAGAAAATATGGACAGAAACCAATAAAAGGTTCACCACACCCAAGAGGTTATTACAAGTGCACCAGCGTGAGAGGCTGCCCAGCACGCAAACACGTGGAGCGTGCTGTGGACGATTCCAACATGCTCGTTGTCACCTACGAAGGAGAACATAATCACTCGCAAATCGCTTCTGAGGTGGCAAATGTTATCCTTGAATCATCTTAG 957 0.4629 MAVSDGNTIAVKEAASAGIHNVEKLVNMILNQHNEGGSELEAVADVAVNRFREVISLLEKPITRTTGHARFRRAPTTVPPVPVVQLQQMVDDDSKHKLQNKTEQKQKQSTSAFKVYCPPPSPPLPQNQNHHHQQQPFILPLHKNEANGSTTNSHFSTLSGDTESLQRSCLSSGFQISHVSMQGGSFKRKPPLSTNSVKRKCNSTGFPDTKCGSSSVQCHCSKKRKLRLKNVIRVPAISSKTADIPPDEYSWRKYGQKPIKGSPHPRGYYKCTSVRGCPARKHVERAVDDSNMLVVTYEGEHNHSQIASEVANVILESS* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2033 318 Pfam WRKY DNA -binding domain 247 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g2033 318 Pfam Plant zinc cluster domain 198 243 IPR018872 -
Gso17g2033 318 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g2033 318 MobiDBLite consensus disorder prediction 93 134 - -
Gso17g2033 318 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 8 318 IPR044810 GO:0003700
Gso17g2033 318 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g2033 318 SUPERFAMILY WRKY DNA-binding domain 241 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g2033 318 Gene3D WRKY domain 232 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g2033 318 PANTHER WRKY TRANSCRIPTION FACTOR NTEIG-D48 8 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2033 Gso-Chr17 39832043 39834169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2033 2 266 WRKY Transcription Factor Family AT4G24240 43.333 5.27e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso17g2033 WRKY 3.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2033 - - gmx:100786245 596.66