Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2031 ATGCAAGTGGGTACCATTGGCAATATTGTTAGCATTTCTGGTCCCTTTTTAACCAAACTTTCTGCCCCCTACCCTTTACTCCTCCCACTCTTTTGGACAATGGAAAGTGGAGTACCCTTCCTTGACTGTCTCTTGCAAAACACTCTTAGAAGCATTTGCTCATTTCCCACTTCTTCAACTTCTTCCAAGTGGGTGTATGCAGTCTTCTGGAGGATAGTACCTCGAAACTTTCCTCCGCCTAGGTGGGAATTTGGAGGAACAGCTCTTGATCGCTCAAAGGGAAACAAAAGAAACTGGATCCTTGTATGGGAAGATGGTTTCTGCGATTTTAATGAATGTGAACAAGGGAGGAATGGATGCTTGAACTACAAGTTTGGAGCTGATGTATTCTTCAAAATGTCTCATGAAGTTTATAGTTATGGAGAAGGACTAATGGGGAAAGTGGCCGCAGATAATAATCATAAATGGGTTTACAGTGACACTCAAAATGGGTGTGAATCTAGCTACATTGGTGCATGGAATGCTTCAATGGATCATCAACCAAAGACATGGGAGTTTCAGTTAAATTCAGGTATTCAGACCATTGCTGTCATTGCTGTCAGAGAAGGCTTAGTACAACTTGGTTCATTTAACAAGATTGCTGAAGATCTCAATTTTGTGGTTAGCATTCAAAGGAAGTTCAGCTACCTCCACAGCATACCAGGTGTATTTTCCATTCAAAGACCACACCTACCCATTCAACATCCATGCATTGCCAAACCAAACCTACAAATGATGGAAAGCAATGAAATGACCCTATCTGCCTATAATGCAACAAATCAAGTCACAAGAGTCAATGGAGTGCATGAGGAAAAATCCAGCTTCTTTTCCATGATATCCATCAACTTGGGTAGGAATCCACCACCCCAAAATGGAACAACAACAACACAAGGGTCACCTCTTTGGTCAGCTCCACCTTCCTTGCCCAACATGTCTTGTAGTTTTGGTGCTATGCTATCAAAGCTTCCATATGTTACTCCTTCCAATAATCCCCCTCAAGTTCTTGAAACCAATAAGACCAACCACAAAGTGAAGATTGAGGAGTGCAGATTTCATGGTGCTGCTAATGGAGATCAGAACAAAAATGCAGGGTGGAATCCTTGA 1143 0.4199 MQVGTIGNIVSISGPFLTKLSAPYPLLLPLFWTMESGVPFLDCLLQNTLRSICSFPTSSTSSKWVYAVFWRIVPRNFPPPRWEFGGTALDRSKGNKRNWILVWEDGFCDFNECEQGRNGCLNYKFGADVFFKMSHEVYSYGEGLMGKVAADNNHKWVYSDTQNGCESSYIGAWNASMDHQPKTWEFQLNSGIQTIAVIAVREGLVQLGSFNKIAEDLNFVVSIQRKFSYLHSIPGVFSIQRPHLPIQHPCIAKPNLQMMESNEMTLSAYNATNQVTRVNGVHEEKSSFFSMISINLGRNPPPQNGTTTTQGSPLWSAPPSLPNMSCSFGAMLSKLPYVTPSNNPPQVLETNKTNHKVKIEECRFHGAANGDQNKNAGWNP* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2031 380 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 129 227 IPR025610 -
Gso17g2031 380 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 45 113 IPR025610 -
Gso17g2031 380 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 34 360 - -
Gso17g2031 380 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 34 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2031 Gso-Chr17 39794155 39796786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2031 46 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 33.333 3.12e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2031 - - gmx:100807289 782.711