Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g2011 ATGAGTTGCAACGGTTGCCGTGTGCTCCGGAAGGGGTGCAGTGACACATGTCCTCTGAGGTCGTGCCTGCAGTGGATCGAGTCTCCGGAGTCACAACGACACGCCACTCTCTTCCTCGCTAAGTTCTTTGGCCGTAGCGACCTAATTTCCTTCATTTCTTCCGTCCCCGAAACCAAAAGACCCGCATTGTTTCAGTCTCTGCTATTTGAAGGGTGCGGGCGAATGGTAAATCCGGTGAACGGTGCCGTGGGACTTCTGTCGAGCGGAAAATGGCACGTGTGTCAGGCCGCTGTGGAGACGGTGCTCGACGGAGGCGTTCTTCGTCCGTCGTCTGAGACATTCACCGGAGATTCCGATGACACGCGCTATCATTTACGGACATTAACACTCATGCATGACGTGAGAGAGATGAATGAGAACTCAAGTTTGATGAATAGACCACAGGAATTGGAGATGGCCAGTTACGGCAACCACAAAAAAAATCAGATTTTGAATTTGTTCATGTAA 507 0.5108 MSCNGCRVLRKGCSDTCPLRSCLQWIESPESQRHATLFLAKFFGRSDLISFISSVPETKRPALFQSLLFEGCGRMVNPVNGAVGLLSSGKWHVCQAAVETVLDGGVLRPSSETFTGDSDDTRYHLRTLTLMHDVREMNENSSLMNRPQELEMASYGNHKKNQILNLFM* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g2011 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 120 - -
Gso17g2011 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 120 - -
Gso17g2011 168 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Gso17g2011 168 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g2011 Gso-Chr17 39482137 39483956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g2011 1 118 AS2 family AT4G37540 76.271 1.55e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso17g2011 LOB 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g2011 - - gmx:100781993 346.28