Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1981 ATGGATCTTGGGGTGGTGGGTTTGGAGGGGGTGGTGGGTTCAGAAAGTGGTTGTGTGTTTGGTTCTTCTCTTGTTTCAGATCCTGAGACAAAGCACAAGTGGTACGGATCTGGTTTGCTCAAGCAAGAGAGATCTGCCATAGCTACTGAAGATGATGAGTGGAGAATTTCCAAAGTTGCTAAAACTGATCATGACATGTCTTCAGCCTCCAAAGCAATGCTCTTTCAGCAAAGAAACAACTCTTTGTTGAGATCTAATAATGCAACTCTCTTCTCTGATGGTCATCACCAATCACAAATGTTGAGCTTCTCTTCTCCAAAGTCAGATTCTTTGTTGATAGATAAGGCTTCCTCAAATGCCACATTGCCTTTTTCTTCCCACCAATTGTCTAGCTACACCAGAAATACAGGTTACAATTCAGGAAGCATAAGCATGCATGGGGCTTTGGCTAGTGTGAGAGGGCCATTCACTCCATCACAGTGGATGGAGCTTGAACACCAAGCCTTGATCTACAAGTACATCACAGCAAATGTTCCTGTGCCAACTCATCTTCTCATTCCCATCAGAAAAGCACTTGATTCTGTTGGCTTCTGCAACTTCTCAGCCGGACTCCTCAGACCCAACTCATTGGGATGGGGAGGTTTCCATCTAGGATTCTCGAACAATACAGACCCTGAGCCAGGGAGGTGTAGGAGAACAGATGGAAAGAAATGGCGATGTTCAAGAGATGCCGTAGTAGATCAGAAGTATTGCGAGCGGCACATGAACCGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTCACCACCACCACCAGTAATACACCTAATGCTTCCTCCAACTCTGTGGTGCCTGGCAACAACAACAACACCTTTGCACACAACAATGTGCACCACCCTATTCCTCCTCATTCCTCTCCGGTCAACACCATCACTAGGATGTTTACAAGCAACAAAGAGAATAATAACAGTACCAGTGAGAGGATGCAGGACCCTGCACTTCCCATGCTTCCTCCCACTCTTGAGCTGAAACCAAAGGAGAACAATCCTTTCATGATTCATAAACACCAAATCCCATCTGATGAATACTCAAGTAGGAACAACAATGAGTTTGGGCTTGTCACTTCTGATTCTTTGCTTAACCCCTCAGAGAAAAGAAGCTTTACTTCTTCACAAAAGAATGATTCTTCTGAGTCCCAACAACAACATTCCCTCAGGCACTTCATTGATGACTCTCCCAAACCACAGTCTAATCATCATCATCGTTCGTCGTCTATATGGCCTGAACTTGACAACATGCAGTCAGACAGGACTCAGTTATCAATCTCCATACCAATATCTTCCTCAGATCACTTCATGTCATTCACTACTTCCTTGCCCTCGAACGAGAAACTCACGTTGTCACCACTTAGGCTTTCAAGGGAGTTAGACCCCATTCAAATGGGGTTGGGAGTGGGAAGTGCCCCCAATGAAGCAAACACTAGGCAAGCCAATTGGATTCCAATCACTTGGGAGAGTTCAATGGGTGGTCCTCTTGGAGAGGTTTTGAACCTTAGTAACAATAACAACAGCAATGCTAGTGATCAATGTGGCAAGAACAACAACAACACTTCAGCTCTCAACCTCATGAAAGATGGATGGGACAATAATCCTCCATCAGGGTCATCCCCAACTGGGGTGCTTCAAAAATCTGCATTTGGATCACTTTCCAATAGCAGTGCTGGGAGCAGTCCAAGGGGGGCAGAGAACAACAAAGAAGGTGCCACCTTGTGCAATGCCTTGTAA 1803 0.457 MDLGVVGLEGVVGSESGCVFGSSLVSDPETKHKWYGSGLLKQERSAIATEDDEWRISKVAKTDHDMSSASKAMLFQQRNNSLLRSNNATLFSDGHHQSQMLSFSSPKSDSLLIDKASSNATLPFSSHQLSSYTRNTGYNSGSISMHGALASVRGPFTPSQWMELEHQALIYKYITANVPVPTHLLIPIRKALDSVGFCNFSAGLLRPNSLGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHALTTTTSNTPNASSNSVVPGNNNNTFAHNNVHHPIPPHSSPVNTITRMFTSNKENNNSTSERMQDPALPMLPPTLELKPKENNPFMIHKHQIPSDEYSSRNNNEFGLVTSDSLLNPSEKRSFTSSQKNDSSESQQQHSLRHFIDDSPKPQSNHHHRSSSIWPELDNMQSDRTQLSISIPISSSDHFMSFTTSLPSNEKLTLSPLRLSRELDPIQMGLGVGSAPNEANTRQANWIPITWESSMGGPLGEVLNLSNNNNSNASDQCGKNNNNTSALNLMKDGWDNNPPSGSSPTGVLQKSAFGSLSNSSAGSSPRGAENNKEGATLCNAL* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1981 600 SMART QLQ_2 154 190 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso17g1981 600 Pfam QLQ 155 189 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso17g1981 600 MobiDBLite consensus disorder prediction 364 436 - -
Gso17g1981 600 MobiDBLite consensus disorder prediction 525 600 - -
Gso17g1981 600 MobiDBLite consensus disorder prediction 410 424 - -
Gso17g1981 600 Pfam WRC 225 267 IPR014977 -
Gso17g1981 600 MobiDBLite consensus disorder prediction 269 336 - -
Gso17g1981 600 ProSiteProfiles WRC domain profile. 224 268 IPR014977 -
Gso17g1981 600 ProSiteProfiles QLQ domain profile. 155 190 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso17g1981 600 PANTHER GROWTH-REGULATING FACTOR 9 26 589 - -
Gso17g1981 600 MobiDBLite consensus disorder prediction 252 352 - -
Gso17g1981 600 PANTHER - 26 589 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gso17g1981 600 MobiDBLite consensus disorder prediction 525 589 - -
Gso17g1981 600 MobiDBLite consensus disorder prediction 368 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1981 Gso-Chr17 39130098 39134866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1981 1 573 GRF Transcription Factor Family AT2G22840 40.826 5.89e-102 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gso17g1981 WRC 5.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1981 - - gmx:100818860 1138.25