Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1947 ATGTCGCGAGCAAGATCACGCTCACCGTCACCGTGCTGCGGTGACACTCACTTAGTGCTGCTGCTGCCTGTGATGCTCGCTGTTTTCTTCCACTCGCTCCTTCTGCTTCCTCACTCCTCGCTCGCTATTCGCCCTACCGAGTCGGATCGGATCGAACTCGCCAACGCGACCGAGTCCAGCAGCAACGCCTCCCTCTCGCGCCCTCGCGAAGGAACCTTCGCCGACATGATTGATCGCGCGCTCGAGCACGAGTTCACCGAGAACGACCAGAATGAAGCGCCTGATCCGGGAAGCTTCAACAACAGTGTAGCAGAACAACAGGCTGTTCTGGAAACTGTGGCCAGAGTCACACCAAACAAGAATGACACGAAAGATGAAAAGTCATTTCAACTACATCATGTATTCAATAGAGCTGAGGAAACCCCAATGTTGATAGATCGAAAGGACAATGTCTTTATCATTTCTAACTTTAAATCCAAGTATCCCGTGCTCCAGCTAGATTTACGATTGATTTCAGACCTGGTAGTTGCTATTGTTTCAGCAACTTGTGGTGGCGTTGCATTTGCTTTTGCTGGACAACCGGTCATTACCGGATATCTTTTAGCTGGCTCCATAGTTGGACCTGGCGGCTTTAACTTCATCAGTGAAATGGTGCAGGTGGAAACAGTGGCACAATTTGGGGTAATATTCCTTTTGTTTGCATTGGGCTTGGAGTTCTCCACAACAAAGCTTCGAGTTGTTCGAGCTGTTGCTGTTCTTGGAGGCCTACTTCAGATTTTTCTATTTATGTGCATGTGTGGGCTTACAGTATCACTATGTGGTGGTAAAGCTTCAGAAGGGGTTTTTGTTGGTGCTTTCCTTTCCATGTCTTCAACAGCAGTGGTCTTGAAGTTTTTGATGGAAAAGAACACCACTAATGCTCTTCATGGACAAGTCACAATTGGGACCCTGATTTTGCAGGATTGTGCTGTTGGATTGCTCTTTGCATTGCTTCCAGTTCTGGGTGGCACCTCAGGTGTTTTTCAAGGAGTGTTATCAATGACCAAGCTGTTGGTGACATTAATTGCATTCCTCTCTGTTCTGTCAATATTGTCTCGCACTTGCCTTCCATGGTTGCTTAAGCTGATGATAAGCCTCTCATCACAGACAAATGAACTCTATCAATTGGCATCAGTTGCATTCTGCTTGCTAGTAGCCTGGTGTAGCGATAAGCTGGGACTAAGTCTAGAACTAGGTTCCTTTGCTGCTGGAGTGATGATTGCAACCACTGATTTGGCTCAACATACACTAGAGCAAATTGAACCTATTCGCAATCTTTTCGCTGCTCTTTTCCTTGCCAGCATTGGAATGCTGATTCATGTTCATTTTCTCTGGAACCATGTTGATATTTTGGTAGCATCTGTAATATTGGTGATTGTTATAAAAACAATCATAATTGCATCTGTTGTGAAAGGATTTGGTTACAATAACAAGACTTCAATACTTGTTGGAATGTCGATGGCACAGATAGGAGAATTTGCTTTTGTTCTTCTCAGTCGTGCTTCAAACCTTCATCTAGTTGAGGGTAAATTATATCTGCTGCTTCTTGGGACCACAGCTCTTAGTCTGGTGACAACTCCTTTACTTTTCAAGCTAATTCCTGCTGTAGTGCATCTTGGTGTCCTACTGAGATGGTTCTCTCCTGATAGTTCAGTGGAGATTGGATATAAGCTAGATAACCTCCGCTCAGATAGTGGTAAGCAGCGGATAATTTTGATGGACCAAGAATCTCATGATTCTTAA 1782 0.4484 MSRARSRSPSPCCGDTHLVLLLPVMLAVFFHSLLLLPHSSLAIRPTESDRIELANATESSSNASLSRPREGTFADMIDRALEHEFTENDQNEAPDPGSFNNSVAEQQAVLETVARVTPNKNDTKDEKSFQLHHVFNRAEETPMLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVAIVSATCGGVAFAFAGQPVITGYLLAGSIVGPGGFNFISEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCMCGLTVSLCGGKASEGVFVGAFLSMSSTAVVLKFLMEKNTTNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVFQGVLSMTKLLVTLIAFLSVLSILSRTCLPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMIATTDLAQHTLEQIEPIRNLFAALFLASIGMLIHVHFLWNHVDILVASVILVIVIKTIIIASVVKGFGYNNKTSILVGMSMAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDSSVEIGYKLDNLRSDSGKQRIILMDQESHDS* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1947 593 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 17 593 IPR045158 GO:0015386|GO:0071805|GO:1902600
Gso17g1947 593 Pfam Sodium/hydrogen exchanger family 175 544 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso17g1947 593 Gene3D - 168 551 IPR038770 -
Gso17g1947 593 PANTHER K(+) EFFLUX ANTIPORTER 6 17 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1947 Gso-Chr17 38631914 38643386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1947 67 593 Antiporters AT5G11800 82.176 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1947 - - gmx:100811030 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0829 14 9105708 9116882 Gso17g1947 17 38631914 38643386 GST