Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1937 ATGTTCCTATTTGAGGTTTCTTCTTGCTCTGTCTTTTTTTCCCTTATTCACTGCTTCCAATATCTTCAATTTCAATTCTTTTATTCTTCTTTTAATTTTCAGGATCTCTGGTCCCTCCCGCGCCTCTTCTCAGAGTCGCTTAATTTACAGTCTTTACGCGAATCCTTTACGAGCTCGAGCTGTGACAGAACGGAGTCGGAGCAATGCCGCGACGAGTCGGCGGCGATGGTTCTGAAATTCGTGGCGGTGGCGTCGATTCTGGTCGCCGGATTCGGGGGAGTCTCGATTCCGCTGGTCGGGAAGTCGCGGCGGTTTCTTCGACCGGACGGCGACGTTTTCGCGGCGGCGAAGGCGTTCGCGGCGGGGGTGATTTTAGCGACGGGGTTCGTCCACATGCTGAGGGACTCGTGGGACGCGCTTCGGGAGCCGTGCTTGGGGACGCACTCGCGCGCGTGGGCGAAGTTTCCCTTCACCGGTTTCTTCGCCATGGTGTCAGCGCTCTTTACTCTACTGGTTGACTTTTTAGCGACGGAATATTACGAGCGCAGAGAGGCGCGTGGGCGCGTGGAGCGAGGGAAGGTTGTTGATTATGATGAAGGTTGTGACGAGGCGTTGTTGGAAACGGGAATCGTGGAGGTTAAGGATCTTGGGCGAGGGGGAAGACACTCCCACTCTCACGACGGCGATGATGTGGAAAGTAGTGTTCGACACGTCGTCGTTTCACAGGTATTGGAACTTGGGATTGTATCACATTCGATGATAATTGGGTTATCTCTAGGAGTTTCACAAAGTCCCTGTACCATGAAACCCCTAATTGTGGCATTATCCTTCCATCAATTCTTTGAAGGATTTGCACTTGGTGGTTGCATCTCCCAAGCCCAATTCAAGACCTTATCAGCAACAATAATGTCATGTTTTTTTGCACTAACAACGCCACTTGGTGTTGCTATTGGAGCTAGTGTTGCTTCAATTTTTAACCCTTACAGTCCAGTAGCACTCATCACTGAAGGCATCTTGGACGCCTTGTCAGCTGGGATTTTAGTGTATATGGCTTTAGTGGACTTAATAGCTGCAGATTTTCTTAGCAAGAAAATGCGTTGTAACTTTAGGTTTCAGATAATATGTTACTGTCTGCTTTTCCTTGGGGCTGGATTGATGTCTTCACTTGCAATTTGGGCATGA 1182 0.4941 MFLFEVSSCSVFFSLIHCFQYLQFQFFYSSFNFQDLWSLPRLFSESLNLQSLRESFTSSSCDRTESEQCRDESAAMVLKFVAVASILVAGFGGVSIPLVGKSRRFLRPDGDVFAAAKAFAAGVILATGFVHMLRDSWDALREPCLGTHSRAWAKFPFTGFFAMVSALFTLLVDFLATEYYERREARGRVERGKVVDYDEGCDEALLETGIVEVKDLGRGGRHSHSHDGDDVESSVRHVVVSQVLELGIVSHSMIIGLSLGVSQSPCTMKPLIVALSFHQFFEGFALGGCISQAQFKTLSATIMSCFFALTTPLGVAIGASVASIFNPYSPVALITEGILDALSAGILVYMALVDLIAADFLSKKMRCNFRFQIICYCLLFLGAGLMSSLAIWA* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1937 393 TIGRFAM zip: ZIP zinc/iron transport family 61 393 IPR004698 GO:0005385|GO:0016021|GO:0071577
Gso17g1937 393 Pfam ZIP Zinc transporter 78 390 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gso17g1937 393 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 218 393 - -
Gso17g1937 393 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 57 192 - -
Gso17g1937 393 PANTHER ZINC/IRON TRANSPORTER 57 192 - -
Gso17g1937 393 PANTHER ZINC/IRON TRANSPORTER 218 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1937 Gso-Chr17 38520535 38524025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1937 52 393 Inorganic Solute Cotransporters AT1G10970 59.574 1.90e-148 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1937 K14709 - gmx:100809426 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g1937 17 38520535 38524025 Gso6g0422 6 3896940 3898997 PCT
Gso6g0422 6 3896940 3898997 Gso17g1937 17 38520535 38524025 PCT