Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1929 ATGGTGTCCATAGTATTGGAATGGTTATTTCCTTTTCCATGTGTAGCCATGTTCACCACCCTTCTGATGTTAATAGGAGGATTATTGGGTTATCTTTATGGGCCCTATTGGGGGCTTAGGAAAGTTCCAGGCCCACCAACGCTGCCGCTGGTAGGACACCTTCCCTTACTGGCTAAATACGGCCCTGATGTCTTCTCACTCCTTGCCAAGCAATATGGCCCAATTTACAGATTTCATATGGGAAGACAACCACTAATCTTGGTAGCAGATCCAGAGCTTTGTAAAGAAGTGGGAATAAAAAAATTCAAAGACATTCCAAACAGAAGCATTCCCTCTCCTATTTCAGCTTCCCCCCTTCACCAAAAAGGTCTCTTCTTTACCAGGGACTCACGTTGGTCAACCATGCGAAACACGATCTTGTCAGTGTACCAGCCATCACACTTGGCTAGCTTAGTGCCAACGATGCAATCATTCATAGAATCCGCAACACAAAATCTTGACACCCCAAATGAGGACATAATCTTTTCCAATCTTTCCTTAAGGCTAGCAACCGATGTGATTGGAGAGGCAGCATTTGGTGTCAATTTTGGCCTCTCTAAGCCACATTCAGTTTGTGAATCAATCAAGAGTGTTAGTGTTAACAATGTGAGAAATGATGATGATGAGGTATCTGATTTCATCAATCAACACATTTACTCCACAACACAACTTAAGATGGACTTGTCTGGTTCATTCTCCATCATACTTGGTCTACTTGCACCAATACTTCAGGAGCCATTTAGGCAGATTCTGAAGAGAATACCAGGCACAATGGACAGCAAAATAGAGAGTACTAATGAGAAGCTGAGTGGTCCTCTTGATGAGATTGTCAAGAGGAGAATGGAAGACAAGAATAGAACTTCAAAGAATTTCTTGTCACTCATTTTGAATGCAAGAGAATCAAAGAAAGTATCTGAAAATGTCTTTTCACCTGATTACATTAGCGCTGTTACTTATGAGCACTTACTTGCTGGGTCAGCTACCACAGCCTTTACCTTGTCATCCATTGTCTACTTGGTTGCTGGACACCGAGAGGTTGAGAAAAAGTTGCTTCAAGAGATTGATGGATTTGGTCCACCTGATAGGATTCCCACAGCTCAAGATCTTCATGACAGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCCATGAGGTTTTACACAGTCTCCCCATTGGTTGCAAGAGAAACATCACATGAGGTGGAGATAGGAGGTTACCTTCTTCCAAAGGGGACATGGGTATGGTTAGCTCTAGGAGTTCTAGCAAAAGATCCAAGGAATTTTCCAGAGCCTGAGAAGTTCAAACCAGAGAGGTTTGACCCCAAATGTGAAGAAATGAAACGAAGACATCCTTATGCATTCATACCATTTGGAATTGGTCCCCGGGCATGTATTGGTCAGAAATTTTCCCTACAAGAGATCAAGCTTACTCTGATTCATTTGTACCAGAAATATGTTTTTCGTCATTCAGTTGACATGGAAAAACCTGTAGAAATGGAATATGGTATGGTTCTCAACTTCAAGCATGGTATCAAGCTTAGAGTCATAAGAAGAACGTAA 1599 0.4184 MVSIVLEWLFPFPCVAMFTTLLMLIGGLLGYLYGPYWGLRKVPGPPTLPLVGHLPLLAKYGPDVFSLLAKQYGPIYRFHMGRQPLILVADPELCKEVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSRWSTMRNTILSVYQPSHLASLVPTMQSFIESATQNLDTPNEDIIFSNLSLRLATDVIGEAAFGVNFGLSKPHSVCESIKSVSVNNVRNDDDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLAPILQEPFRQILKRIPGTMDSKIESTNEKLSGPLDEIVKRRMEDKNRTSKNFLSLILNARESKKVSENVFSPDYISAVTYEHLLAGSATTAFTLSSIVYLVAGHREVEKKLLQEIDGFGPPDRIPTAQDLHDSFPYLDQVIKEAMRFYTVSPLVARETSHEVEIGGYLLPKGTWVWLALGVLAKDPRNFPEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLTLIHLYQKYVFRHSVDMEKPVEMEYGMVLNFKHGIKLRVIRRT* 533
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1929 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Gso17g1929 532 PANTHER THROMBOXANE-A SYNTHASE 11 532 - -
Gso17g1929 532 SUPERFAMILY Cytochrome P450 36 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 Pfam Cytochrome P450 43 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 Gene3D Cytochrome P450 33 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1929 532 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 532 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso17g1929 Gso-Chr17 38382413 38387985 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1929 80 531 Cytochrome P450 AT2G26170 73.230 0.0 665
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1929 K20771 - gmx:100805689 1043.88
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0852 14 9486321 9497758 Gso17g1929 17 38382413 38387985 GST
Gso17g1929 17 38382413 38387985 Gso4g0447 4 4225486 4232437 PCT
Gso17g1929 17 38382413 38387985 Gso6g0428 6 3965403 3975142 PCT
Gso4g0447 4 4225486 4232437 Gso17g1929 17 38382413 38387985 PCT
Gso6g0428 6 3965403 3975142 Gso17g1929 17 38382413 38387985 PCT