Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso17g1929 | ATGGTGTCCATAGTATTGGAATGGTTATTTCCTTTTCCATGTGTAGCCATGTTCACCACCCTTCTGATGTTAATAGGAGGATTATTGGGTTATCTTTATGGGCCCTATTGGGGGCTTAGGAAAGTTCCAGGCCCACCAACGCTGCCGCTGGTAGGACACCTTCCCTTACTGGCTAAATACGGCCCTGATGTCTTCTCACTCCTTGCCAAGCAATATGGCCCAATTTACAGATTTCATATGGGAAGACAACCACTAATCTTGGTAGCAGATCCAGAGCTTTGTAAAGAAGTGGGAATAAAAAAATTCAAAGACATTCCAAACAGAAGCATTCCCTCTCCTATTTCAGCTTCCCCCCTTCACCAAAAAGGTCTCTTCTTTACCAGGGACTCACGTTGGTCAACCATGCGAAACACGATCTTGTCAGTGTACCAGCCATCACACTTGGCTAGCTTAGTGCCAACGATGCAATCATTCATAGAATCCGCAACACAAAATCTTGACACCCCAAATGAGGACATAATCTTTTCCAATCTTTCCTTAAGGCTAGCAACCGATGTGATTGGAGAGGCAGCATTTGGTGTCAATTTTGGCCTCTCTAAGCCACATTCAGTTTGTGAATCAATCAAGAGTGTTAGTGTTAACAATGTGAGAAATGATGATGATGAGGTATCTGATTTCATCAATCAACACATTTACTCCACAACACAACTTAAGATGGACTTGTCTGGTTCATTCTCCATCATACTTGGTCTACTTGCACCAATACTTCAGGAGCCATTTAGGCAGATTCTGAAGAGAATACCAGGCACAATGGACAGCAAAATAGAGAGTACTAATGAGAAGCTGAGTGGTCCTCTTGATGAGATTGTCAAGAGGAGAATGGAAGACAAGAATAGAACTTCAAAGAATTTCTTGTCACTCATTTTGAATGCAAGAGAATCAAAGAAAGTATCTGAAAATGTCTTTTCACCTGATTACATTAGCGCTGTTACTTATGAGCACTTACTTGCTGGGTCAGCTACCACAGCCTTTACCTTGTCATCCATTGTCTACTTGGTTGCTGGACACCGAGAGGTTGAGAAAAAGTTGCTTCAAGAGATTGATGGATTTGGTCCACCTGATAGGATTCCCACAGCTCAAGATCTTCATGACAGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCCATGAGGTTTTACACAGTCTCCCCATTGGTTGCAAGAGAAACATCACATGAGGTGGAGATAGGAGGTTACCTTCTTCCAAAGGGGACATGGGTATGGTTAGCTCTAGGAGTTCTAGCAAAAGATCCAAGGAATTTTCCAGAGCCTGAGAAGTTCAAACCAGAGAGGTTTGACCCCAAATGTGAAGAAATGAAACGAAGACATCCTTATGCATTCATACCATTTGGAATTGGTCCCCGGGCATGTATTGGTCAGAAATTTTCCCTACAAGAGATCAAGCTTACTCTGATTCATTTGTACCAGAAATATGTTTTTCGTCATTCAGTTGACATGGAAAAACCTGTAGAAATGGAATATGGTATGGTTCTCAACTTCAAGCATGGTATCAAGCTTAGAGTCATAAGAAGAACGTAA | 1599 | 0.4184 | MVSIVLEWLFPFPCVAMFTTLLMLIGGLLGYLYGPYWGLRKVPGPPTLPLVGHLPLLAKYGPDVFSLLAKQYGPIYRFHMGRQPLILVADPELCKEVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSRWSTMRNTILSVYQPSHLASLVPTMQSFIESATQNLDTPNEDIIFSNLSLRLATDVIGEAAFGVNFGLSKPHSVCESIKSVSVNNVRNDDDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLAPILQEPFRQILKRIPGTMDSKIESTNEKLSGPLDEIVKRRMEDKNRTSKNFLSLILNARESKKVSENVFSPDYISAVTYEHLLAGSATTAFTLSSIVYLVAGHREVEKKLLQEIDGFGPPDRIPTAQDLHDSFPYLDQVIKEAMRFYTVSPLVARETSHEVEIGGYLLPKGTWVWLALGVLAKDPRNFPEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLTLIHLYQKYVFRHSVDMEKPVEMEYGMVLNFKHGIKLRVIRRT* | 533 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso17g1929 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 470 | 479 | IPR017972 | GO:0005506|GO:0016705 | |
| Gso17g1929 | 532 | PANTHER | THROMBOXANE-A SYNTHASE | 11 | 532 | - | - | |
| Gso17g1929 | 532 | SUPERFAMILY | Cytochrome P450 | 36 | 531 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | PRINTS | E-class P450 group I signature | 69 | 88 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | PRINTS | E-class P450 group I signature | 182 | 200 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | PRINTS | E-class P450 group I signature | 326 | 343 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | PRINTS | E-class P450 group I signature | 346 | 372 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | PRINTS | E-class P450 group I signature | 390 | 408 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | PRINTS | E-class P450 group I signature | 430 | 454 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | PRINTS | E-class P450 group I signature | 467 | 477 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | PRINTS | E-class P450 group I signature | 477 | 500 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | Pfam | Cytochrome P450 | 43 | 520 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | PRINTS | P450 superfamily signature | 337 | 354 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | PRINTS | P450 superfamily signature | 391 | 402 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | PRINTS | P450 superfamily signature | 468 | 477 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | PRINTS | P450 superfamily signature | 477 | 488 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | Gene3D | Cytochrome P450 | 33 | 532 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Gso17g1929 | 532 | PANTHER | CYTOCHROME P450 FAMILY PROTEIN | 11 | 532 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso17g1929 | Gso-Chr17 | 38382413 | 38387985 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gso17g1929 | 80 | 531 | Cytochrome P450 | AT2G26170 | 73.230 | 0.0 | 665 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso17g1929 | K20771 | - | gmx:100805689 | 1043.88 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso14g0852 | 14 | 9486321 | 9497758 | Gso17g1929 | 17 | 38382413 | 38387985 | GST | |
| Gso17g1929 | 17 | 38382413 | 38387985 | Gso4g0447 | 4 | 4225486 | 4232437 | PCT | |
| Gso17g1929 | 17 | 38382413 | 38387985 | Gso6g0428 | 6 | 3965403 | 3975142 | PCT | |
| Gso4g0447 | 4 | 4225486 | 4232437 | Gso17g1929 | 17 | 38382413 | 38387985 | PCT | |
| Gso6g0428 | 6 | 3965403 | 3975142 | Gso17g1929 | 17 | 38382413 | 38387985 | PCT |