Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1911 ATGAGTTTCAAGAACAGTCCTAAAATTCAGCACATAGGAGCCTCTCCAAACGTGTCTCGCCAATCATCCACTTCTAGTTTTAGGGACAAACAACAGAAGAATGTGGAGCCACCAAGCCCTTTACCTGTTGGATGCTGCAGAGGCTTCAGCATTGCCAAGACTATTGGGTCCCCTGCCTCCACATCACAACAAAATATGCAACAGTTACAATACCAAAGACTTGAAGTAAAGGTGGCGGATTTGGAAAAGAAAGTGCAAAAACAATCAGAACTACGAGTAATGTACAAGAAAAGAATGGAAAGGACTCAAGATTACTTGAGGAACTGCCTTCAGATAGCACAAGAAAATGGAATATTAGATGTCATTGTGAACTGCAAAGGTGAATTTCAACAATCTCCAGTCTCTATCCACACCATAAGCTCCATTACCAGCCCTCAAATTCAAATTCCCACTCCACCACACCATGGCCACCACACCAATCTTGCGTCCATCATAGATCAAGCAAAAATCAATGGATGGTATATTGATCCAAATGAGATTCAACTGGAAGAGAAAATCGGGCAGGGCAGCACCGCAGAAATTCACAGAGGAAAATGGCGTGGATTTGAAGTGGCAGTGAAGTGCATATCCGAAGAATTTTTCCGCACTAACCAAAACGGTGTCGCATACTTCTCCCAGGAGCTCGAAACGTTGTCGCGGCAGCGCCACAGGTTCGTGCTTCAGCTCATGGGCGCGTGCATTGACCCTCCCCGACGCGCGTGGGTGGTCACAGAACATCTCAGCACCACGTTGAAGGAGTGGCTGCACGGGCCCGGGACCAGGCTCAGAGAGCGAATGGTGCCACTTCCACTCTTCAAAGACAGAGTCATTAGGGCCCTTGAAATAGCCCAAGCCATGCAGTATCTGCACGAGCAAAAGCCCAAGCTCGTTCACCGTGACTTGAAGCCTAGCAACATTTTTCTTGATGATGCCATGCATGTTAGAGTCGCGGATTTTGGTCATGCGCGGTTCTTGGGTGATGAGGAAATGGCTCTCACTGGAGAAACAGGAACATACGTGTACATGGCACCAGAGGTGATCCGATGTGAACCTTATGATGAAAAGTGTGATGTGTACAGTTTTGGGGTTATGTTGAACGAACTTTTAACTGGACATTACCCATATGTTGAGACAGAATATGGTCCCACCAAGATTGCCATTGAAGTTGTGGAGGGTAACCTGCGACCTAAGCTTCCGTGTGATGATGTTGGCCAACCGAGAGAGCTTATTGACCTTATATGCCTTTGCTGGGACAAAAATCCATCTACTCGACCATCTTTTGCTACAATCACCCTTTGCCTCAAAAGTTATGCCAAGAAAAATCTCCTTTAA 1371 0.4646 MSFKNSPKIQHIGASPNVSRQSSTSSFRDKQQKNVEPPSPLPVGCCRGFSIAKTIGSPASTSQQNMQQLQYQRLEVKVADLEKKVQKQSELRVMYKKRMERTQDYLRNCLQIAQENGILDVIVNCKGEFQQSPVSIHTISSITSPQIQIPTPPHHGHHTNLASIIDQAKINGWYIDPNEIQLEEKIGQGSTAEIHRGKWRGFEVAVKCISEEFFRTNQNGVAYFSQELETLSRQRHRFVLQLMGACIDPPRRAWVVTEHLSTTLKEWLHGPGTRLRERMVPLPLFKDRVIRALEIAQAMQYLHEQKPKLVHRDLKPSNIFLDDAMHVRVADFGHARFLGDEEMALTGETGTYVYMAPEVIRCEPYDEKCDVYSFGVMLNELLTGHYPYVETEYGPTKIAIEVVEGNLRPKLPCDDVGQPRELIDLICLCWDKNPSTRPSFATITLCLKSYAKKNLL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1911 456 Gene3D Phosphorylase Kinase; domain 1 168 260 - -
Gso17g1911 456 ProSiteProfiles Protein kinase domain profile. 180 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1911 456 Pfam Protein kinase domain 181 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1911 456 SUPERFAMILY Protein kinase-like (PK-like) 151 443 IPR011009 -
Gso17g1911 456 Gene3D Transferase(Phosphotransferase) domain 1 284 455 - -
Gso17g1911 456 CDD STKc_MAP3K-like 186 444 - -
Gso17g1911 456 MobiDBLite consensus disorder prediction 1 33 - -
Gso17g1911 456 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 32 453 - -
Gso17g1911 456 MobiDBLite consensus disorder prediction 1 41 - -
Gso17g1911 456 ProSitePatterns Protein kinases ATP-binding region signature. 186 207 IPR017441 GO:0005524
Gso17g1911 456 PANTHER OS09G0443600 PROTEIN 32 453 - -
Gso17g1911 456 Coils Coil 64 91 - -
Gso17g1911 456 PIRSF TyrPK_CSF1-R 52 124 - -
Gso17g1911 456 PIRSF TyrPK_CSF1-R 273 455 - -
Gso17g1911 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Gso17g1911 456 SMART serkin_6 180 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1911 Gso-Chr17 38028372 38034414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1911 173 443 MAP Kinase Kinase Kinase AT4G35780 37.500 1.91e-49 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Gso17g1911 Pkinase 6.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1911 - - gmx:102666416 883.248