Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1908 ATGAGTTCGATTCCAACAACCACCTACGAAGATTCTTCAGCAGTTAACATTTCAGAATTCCAACCTCAATCTCACGCACCGAAGGAAATTGAGTGGCACATGCTCGACAAGTCAAAGTTCTTCTTCCTGGGAGCAGCCTTGTTCTCCTCTCTCTCCGCCGCCCTCTACCCCGCCGTGGTCTTGAAGACACGTCAGCAAGTTTCCTCCGCCAAAATCTCGTGCCGCAACATGTCACGCGCCATCATTCGCTACGAGGGTTTCCGAGGTTTCTACCGAGGTTTCGGCACTTCCTTAATGGGAACAATCCCCGCACGTGCGCTTTACATGTCTGCGCTTGAAGTCACGAAGAGCAACGTCGGCACCGCCACCGCTCACTTGGGGTTTTCCGATGCGTCGGCCGCTGCCATCGCTAATGCCGCCGGAGGCGTAGCTTCCGCCATGGCGGCACAATTGGTGTGGACCCCAGTTGATGTCGTGAGCCAAAGACTCATGGTTCAAGAAAGCAACAAAATGTGTTACAGGAATGGTTTTGATGCATTTAGGAAAATTCTGGGTGTTGAAGGGCCAAGGGGGTTTTACAGAGGGTTTGGGGTTTCCATAGTGACTTATGCTCCCTCTAACGCAGTTTGGTGGGCTTCGTATTCAATGGTAAACAGGCTTATTTGGGGCGTGTTTGGTGGTTGTGGTAATTCAAATTTTGGACGCGATTCGAAGGTGATGGTGGGTGTGCAAGGGTTGAGTGCAGTTATGGCTAGTGGGGTTTCGACTATTGTGACTATGCCACTTGACACGATCAAGACGAGGTTGCAAGTGTTGGATGCAGAAGAGATTAATGGACGAAGGAGGCCATTGACTCTTGTGCAAGCGGTTCATAACTTGGTGAAGGAAGGGGGAATCTTGGCTTGTTACAGAGGCTTGGGACCAAGGTGGGCTTCTATGTCCATGTCTGCGGCAACCATGATTACTACCTATGAGTTCTTGAAACGCGTGTCTGCTAAGAATCTGGATAGATTCATTGTGTAG 1023 0.5034 MSSIPTTTYEDSSAVNISEFQPQSHAPKEIEWHMLDKSKFFFLGAALFSSLSAALYPAVVLKTRQQVSSAKISCRNMSRAIIRYEGFRGFYRGFGTSLMGTIPARALYMSALEVTKSNVGTATAHLGFSDASAAAIANAAGGVASAMAAQLVWTPVDVVSQRLMVQESNKMCYRNGFDAFRKILGVEGPRGFYRGFGVSIVTYAPSNAVWWASYSMVNRLIWGVFGGCGNSNFGRDSKVMVGVQGLSAVMASGVSTIVTMPLDTIKTRLQVLDAEEINGRRRPLTLVQAVHNLVKEGGILACYRGLGPRWASMSMSAATMITTYEFLKRVSAKNLDRFIV* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1908 340 Gene3D Mitochondrial carrier domain 229 338 IPR023395 -
Gso17g1908 340 Gene3D Mitochondrial carrier domain 4 223 IPR023395 -
Gso17g1908 340 Pfam Mitochondrial carrier protein 136 221 IPR018108 -
Gso17g1908 340 Pfam Mitochondrial carrier protein 243 334 IPR018108 -
Gso17g1908 340 Pfam Mitochondrial carrier protein 52 118 IPR018108 -
Gso17g1908 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 239 330 IPR018108 -
Gso17g1908 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 19 336 - -
Gso17g1908 340 SUPERFAMILY Mitochondrial carrier 33 327 IPR023395 -
Gso17g1908 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 36 118 IPR018108 -
Gso17g1908 340 PRINTS Mitochondrial carrier protein signature 91 109 IPR002067 GO:0055085
Gso17g1908 340 PRINTS Mitochondrial carrier protein signature 142 164 IPR002067 GO:0055085
Gso17g1908 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 19 336 - -
Gso17g1908 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 220 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1908 Gso-Chr17 37983906 37985890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1908 23 334 Chloroplast and Mitochondria Gene Families AT5G26200 65.015 6.50e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1908 K15121 - gmx:100797365 624.394