Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1905 ATGACAGACAAAATACCAAAACCACCACCACCAGATACACCTGACAGTGATGATTTCACCAACCAGTGGCCTTTTGAGCTCTCTGAGTACTTGAAATTCGATGATAATCAGTGGATGCATGATGGTCTTGAGTCATTTGCTTCTGAGAATGTCTCAAACCAGGTTCATCAAGTCAGTAATGCAGGTGAGTTTGGAGGAGGAAGCAGCCACTTTGAAGGGTCTTCTAGCAATACTAGCAGTGGACGTGAGAATAGGGAAGTTAGAGAGAGAGTTGCATTCAAAATAATGTCAGAGATTGAAGTTCTTGATGATGGCTACAGATGGAGGAAGTACGGAAAGAAAATGGTGAAAAACAGTCCCAATCCAAGGAATTACTATAGGTGTTCAGTGGATGGATGCAACGTGAAAAAGAGAGTGGAGAGAGACAAGGATGACCCAAGGTATGTAATAACAACCTACGAAGGCAACCACACTCATCCAAGTTCTTCCTAG 492 0.4289 MTDKIPKPPPPDTPDSDDFTNQWPFELSEYLKFDDNQWMHDGLESFASENVSNQVHQVSNAGEFGGGSSHFEGSSSNTSSGRENREVRERVAFKIMSEIEVLDDGYRWRKYGKKMVKNSPNPRNYYRCSVDGCNVKKRVERDKDDPRYVITTYEGNHTHPSSS* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1905 163 MobiDBLite consensus disorder prediction 57 86 - -
Gso17g1905 163 Gene3D WRKY domain 89 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g1905 163 MobiDBLite consensus disorder prediction 57 81 - -
Gso17g1905 163 Pfam WRKY DNA -binding domain 103 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g1905 163 MobiDBLite consensus disorder prediction 1 15 - -
Gso17g1905 163 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 161 IPR044810 GO:0003700
Gso17g1905 163 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 161 - -
Gso17g1905 163 MobiDBLite consensus disorder prediction 1 21 - -
Gso17g1905 163 SUPERFAMILY WRKY DNA-binding domain 95 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g1905 163 ProSiteProfiles WRKY domain profile. 97 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g1905 163 SMART WRKY_cls 102 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1905 Gso-Chr17 37970340 37971970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1905 25 161 WRKY Transcription Factor Family AT5G26170 51.948 5.54e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso17g1905 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1905 - - gmx:100796836 289.271