Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1891 ATGGCTGGTTATTCAAAAGCTTCAGCTCTTTGGATCCTTTTTCTTCTCTTTGGCTTCTCTGTAGCTAAGGAAATTTTGGTTGGAGGTAAGACTGATGCATGGAAGGTTTCAGCCTCTGAATCAGATTCACTCAACCAATGGGCAGAAAAGTCTCGTTTCCAAGTTGGAGACTATCTTGTTTGGAAATATGATGGTGGAAAAGACTCAGTGTTGCAAGTGAGCAAAGAGAACTATGTGAATTGCAGCATCTCAAACCCCATAAAGGAGTACAATGATGATACCACAAAGGTTCAGCTTGAGCATCCAGGGCCATTCTACTTCATCAGTGGTGCAAAGGGTCACTGTGAGAAGGGTCAGAAGCTTGTTGTGGTGGTTTTGACTCCAAGGAGAGGAACAAGGTTCACTGGTTTTGCTGCACCTTCACCAGCTCCTTCTGCTTCTGCTGAGTTTGAAGGTCCTGCTGTTGCTCCCACTAGCACTGCCAATGCTTTGAATGGGGGAATTTTGATGGTGGCTATGGGAATGATTGCTATGTGGGTTTTTTTTATGTGA 552 0.4438 MAGYSKASALWILFLLFGFSVAKEILVGGKTDAWKVSASESDSLNQWAEKSRFQVGDYLVWKYDGGKDSVLQVSKENYVNCSISNPIKEYNDDTTKVQLEHPGPFYFISGAKGHCEKGQKLVVVVLTPRRGTRFTGFAAPSPAPSASAEFEGPAVAPTSTANALNGGILMVAMGMIAMWVFFM* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1891 183 SUPERFAMILY Cupredoxins 22 126 IPR008972 -
Gso17g1891 183 Gene3D - 21 129 IPR008972 -
Gso17g1891 183 ProSiteProfiles Phytocyanin domain profile. 23 127 IPR003245 GO:0009055
Gso17g1891 183 PANTHER EARLY NODULIN-LIKE PROTEIN 3 7 148 - -
Gso17g1891 183 PANTHER BLUE COPPER PROTEIN 7 148 IPR039391 GO:0009055
Gso17g1891 183 CDD OsENODL1_like 23 126 IPR041846 -
Gso17g1891 183 Pfam Plastocyanin-like domain 34 119 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1891 Gso-Chr17 37837916 37839099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1891 1 183 Phytocyanin Superfamily AT4G31840 48.649 1.49e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1891 - - gmx:100305787 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0890 14 10432432 10433950 Gso17g1891 17 37837916 37839099 GST
Gso17g1891 17 37837916 37839099 Gso4g0515 4 4924878 4926069 PCT
Gso17g1891 17 37837916 37839099 Gso6g0511 6 4670832 4671930 PCT
Gso4g0515 4 4924878 4926069 Gso17g1891 17 37837916 37839099 PCT
Gso6g0511 6 4670832 4671930 Gso17g1891 17 37837916 37839099 PCT