Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1885 ATGGCATTGTTCCGCAAATTCTTCTATAAGAAGCCCCCAGATGGGCTTCTAGAAATCACTGAAAGAGTTTATGTCTTTGATTACTGCTTTACCACGGATGTTATGGAAGAAGATGAATATAGAGTGTATATAGGAGGAATAATTGGGCAACTTCGTGGTCACTTCCCCGATGCTTCATTTATGGTGTTCAACATGCGGGAGGGAGATAGCCAAAGCCAGATTTCAAACATTTTGTGTGACTATGATATGACTGTGATAGACTATCCTCGACAGTATGAAGGTTGCCCGTTACTTACCATGGAGATGATCCACCATTTCTTGAGATCAGGTGAAAACTGGCTTCAACTTGGGCAACAAAATGTTGTCTTGATGCACTGCGAACGAGGTGGTTGGCCATTATTAGCGTTTATGCTAGCTGCACTCTTGATTTATAGAAAGATGTTTACAGGGGAGCAGAAAACACTAGATATGATATACAAGCAAGCTCCTCGGGAACTTTTGCAGTTGATGTCACCGCTGAATCCTTTACCTTCACAATTGAGGTATCTTCAGTACATATCAAGAAGAAATGTTGGCTCAGAATGGCCTCCTCTTGATAGGGCACTTACTTTGGACTGTGTAATTATAAGACTCGTTCCTAATATGGGTGGAGAGGGTGGCTGCCGTCCTATATTTAGGATATATGGACAGGACCCTTTTATTCCTGCAGATCGAACTCCCAAAGTTCTCTTTTCAACTCCAAAAAGGAGCAAACTTGTCCGCTATTACAAGCAGGCTGATTGTGAACTAGTTAAGATTGACATCCATTGTCATGTTCAAGGTGATGTCGTTTTTGAGTGTATTCATCTGAACAGTGATTTAGAGCATGAAGAAATGATGTTTCGGGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTTAACCGTGATGAGCTTGACATATTATGGAATGCTAAAGACTACTTTCCTAAAAACTTTAGAGTGGAGGTTCTTTTCTCAGATATGGATGCTTCGTCTTCTGTTATTTCAATTGATCTGCCTCATGTTGAGGAGAAAGAAGGCCTACCCGTTGAAGCATTTGCTAAGGTCAAGGAAATTTTCAGCAATGTGGACTGGCTAGATTCAAAGGCAGAGGTAGCAAGTGTGCTCCAACAGATCACAGCATCAAATATCTTTCTTGAAAGACTGGACAGTGGGATTTCTGCTTCAACAAGTGGCTTGCAAAAGGAGTCATCTGGAAAATCTAAACTTGATTCGAAGGAACACAGTGACTCAAAGAATCTGACTTCAACAGTTCAGGAGAAACATTCTACGTCCTCCTTGGGATCATCAGTTGATGTTCCTATGGAAAATAAGACAGAACTATTACAATTAAAGGCATTGTCAGGAAATAACGTTGAGAGTCTTGAATGTTTAGGTCAGGGGGACCAACCTATTCCCTCATTTGGGCCCTCAACAGATTCAGATTCTACTAAAAAGGCACGAAATGATTCAAAGAATCTGACTTCAACAGTTCAGGAGAAAGTTTCCACATCCTCCTTGGGATCATCAGTGGATGTTCCTATGGAAAATAAGACAGAATCATTACAATCAAAGGCATTGTCAGGAAATAACATTGAGAGTCTTGAATGTATAGGTCAGGGGAACCAACCTATTCCCTCATTTGGGCCCTCAACAGATTCAGATTCTATTAAAAAGGAGGTTGAATCATTAGAAACAAAACAATCATTAGAAAATGATACCAAGTTTACTGCATCTACGGCTCACGAGAATCGATCCATCCCCTTAAGTGAGCCATCAATGGATTCAAACTTAATAAAAAAGAAGAGTGGATCATTAGAATCCAAGGAGAAGGATATTAAGTCATTAGCATCAAAGGCATTGGTGGAAAACAATACCAAGGTTCCTACATCCATGGCTCATGGGGAGCAGTCTATGCCCTTAATTGAACCATCAAAAGATGCAAATTCAATGAAACAAAAGATGGAACGATTAGATTCAAAGGAAAAGGATACCGAATCATTAGAATCCAAGTCATTGTTGGAAAATGATACCAACTATCCTCCATCTATGGCTCATGGGAAACAATCTTTTCCCTTAATTCAACCATCGACTGATGCAAATTCAGTGAAAAAGATGGGACAATTAGAACAAATGGTATTGCCGGAAAATGATGTCAAGAGTGTCACATCCACAGTTCAGAGGAAACAATATGGTCCCTTACTTGAGCCACCTGTTGATGCAAACCTAATTAAAAAGAAGATTGAACCTCAAGAATTGCAGGTTGCACTTCAGCTTCCCACTCAATCTAAAATAATTTCACCACGGGATCATGCACCAATGGATATCAAAGAAGTCACTCATGCAGTGAAAGTATCTCCTCCGCCTTCTACTTTGCCTCCTTTAGACTCCAAGGTGCCAAATTCTTTAGAGCCTAGTTCTACAATTGTTCCTCCAACATCATCACCACCATTGCTTCCATCTTTACCATTAAAAACTTCAGTTGATGCTCTTACTGCCATGGAAAAGACTTTTGGATCCATTGCTCCTGCAGCTGTCACTCCTCCTCCACCACCACCACCACCACCACCTCCTCCTCAGAGCGAGCATACTTCAAAATTGATGCAATCTAATGCTACACAGTACCCTGAAAATGCAACGCATGATGAAGGTAAGAAATCATTGGTTAGTCCTCCTCCTCCTCCGCCCCTTTCAATGCCAGCTCCTCCAACCAAGTCTTTATCCCATCCTCCAGCCCCTTCCCTTCCTGGAACATCACTTGCCACTGCCAAAGATTCATTTAAAGGTCCTCCTCCACCACCGCCTCCACCTACACCTCCATCTTCAACTAATCAGGCTTCGTCATCCTCGATACCTCCTCCTCCTCCACTGTCTGGGTTTCCTTCTTCAGCCTCCCACCCTCTTTCTTCTTCATCGAGTATGAGCAAGTCTGTTGGTACGCCTGGCCCTCCTCCCCCACCTCCACCTCCTAGCCATTCTAGTTCTACTCCATCACCATTAGCGCCACCACCACCCCCTCCTCCAGCTTCTGCATCCCAGAATTCTTTGTCTAAGAACTCCGCAAATGTTCCACCTCCCCCACCTCCTCTTGCTGCCAATGGGTTGTCAAAACCTGCTGTTCCCGGACCACCTTCTGCTCCATTCGGTGCAAAGGGACGTGGCAGCCTGTTGCGTGCTAATCCAAAAGGTCAGTCTCAGACTAAAAGGAGCAATCTGAAACCTTACCATTGGTTAAAATTAACGAGGGCAATGCAAGGAAGCTTATGGGCTGAGACACAGAAACTAGATGAATTTTGTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAGAGTTTGTTCTCTGCAGCTGCACCAAATTCTAATGATGGAAAAGGAGGAAAGATGACTCGCCGCTCCTCACTTAAAGTTGACAAAGTTCAATTGATTGAGCTCAGGCGGGCATATAACTGTGAGATCATGCTTACAAAAGTCAAAATCCCTTTGCCTGATCTGATGTGTGCTGTGCTTGCATTGGATGATTCAGTATTGGATGTTGATCAAGTTGAGAACCTCATAAAATTCTCTCCAACCAAAGAAGAGATGGAAATGCTGAAGAACTATAATGGGGATAAGGACAACTTGGGAAAGTGTGAACAGTTCTTCTTAGAATTAATGAAAGTGCCAAGAGTGGAAAACAAGCTAAGAGTTTTCGCTTTTAAGATGCAATTCTTAACCCAGGTTTCAGAGCTTAAAAGGGACTTGAATATTGTAAATGATGCATCTGAACAGATAAGGAATTCAGTCAAGTTGAAAAGAATCATGCAGACCATTCTTTCTCTGGGTAATGCTTTGAACCATGGAACTGCAAGAGGTTCGGCTGTGGGGTTTCGATTGGATAGTCTCCTTAAACTCACTGATACACGTGCCAGAAACAACAAGATGACTCTTATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTTCCAGAACTTCTAGATTTCCACAAAGACCTAGGGAGTTTGGAGGCTGCAACCAAGATACAATTAAAATATTTGGCAGAGGAAATGCAAGCTGTTAGTAAAGGACTGGAGAAAGTAGTTCAGGAATTGACTGCATCAGAGAATGATGGACCTGTGTCAGAAAATTTCTGCCAGATTTTGAAGGAATTTCTTTCTTATGCTGAGGCTGAAGTGAGGTCTTTGGCTCAACTATATGCCAATGTGGGTAGAAATGCAGATGCATTGGCTTTGTACTTTGGTGAAGATCCAGCACGTGTCCCATTTGAACAAGTTGTATCTACTCTCCTCAACTTTGTGAGAATGTTCATAAAAGCGCATGAAGAAAATTGCAAGCAGATTGAATTAGAAAAAAAGAGAGCAGATAAGGAAGCTGAAAGTGAGAAGTCGAAGCTAGCTGCTGCTAAAAAGGAGTCTGAACAGATGTTAGGGACCACCATAAAGAGTGGGAATATTAAATGA 4488 0.42 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMEEDEYRVYIGGIIGQLRGHFPDASFMVFNMREGDSQSQISNILCDYDMTVIDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNVVLMHCERGGWPLLAFMLAALLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRLVPNMGGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKRSKLVRYYKQADCELVKIDIHCHVQGDVVFECIHLNSDLEHEEMMFRVMFNTAFIRSNILMLNRDELDILWNAKDYFPKNFRVEVLFSDMDASSSVISIDLPHVEEKEGLPVEAFAKVKEIFSNVDWLDSKAEVASVLQQITASNIFLERLDSGISASTSGLQKESSGKSKLDSKEHSDSKNLTSTVQEKHSTSSLGSSVDVPMENKTELLQLKALSGNNVESLECLGQGDQPIPSFGPSTDSDSTKKARNDSKNLTSTVQEKVSTSSLGSSVDVPMENKTESLQSKALSGNNIESLECIGQGNQPIPSFGPSTDSDSIKKEVESLETKQSLENDTKFTASTAHENRSIPLSEPSMDSNLIKKKSGSLESKEKDIKSLASKALVENNTKVPTSMAHGEQSMPLIEPSKDANSMKQKMERLDSKEKDTESLESKSLLENDTNYPPSMAHGKQSFPLIQPSTDANSVKKMGQLEQMVLPENDVKSVTSTVQRKQYGPLLEPPVDANLIKKKIEPQELQVALQLPTQSKIISPRDHAPMDIKEVTHAVKVSPPPSTLPPLDSKVPNSLEPSSTIVPPTSSPPLLPSLPLKTSVDALTAMEKTFGSIAPAAVTPPPPPPPPPPPPQSEHTSKLMQSNATQYPENATHDEGKKSLVSPPPPPPLSMPAPPTKSLSHPPAPSLPGTSLATAKDSFKGPPPPPPPPTPPSSTNQASSSSIPPPPPLSGFPSSASHPLSSSSSMSKSVGTPGPPPPPPPPSHSSSTPSPLAPPPPPPPASASQNSLSKNSANVPPPPPPLAANGLSKPAVPGPPSAPFGAKGRGSLLRANPKGQSQTKRSNLKPYHWLKLTRAMQGSLWAETQKLDEFCRAPEFDMSELESLFSAAAPNSNDGKGGKMTRRSSLKVDKVQLIELRRAYNCEIMLTKVKIPLPDLMCAVLALDDSVLDVDQVENLIKFSPTKEEMEMLKNYNGDKDNLGKCEQFFLELMKVPRVENKLRVFAFKMQFLTQVSELKRDLNIVNDASEQIRNSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFHKDLGSLEAATKIQLKYLAEEMQAVSKGLEKVVQELTASENDGPVSENFCQILKEFLSYAEAEVRSLAQLYANVGRNADALALYFGEDPARVPFEQVVSTLLNFVRMFIKAHEENCKQIELEKKRADKEAESEKSKLAAAKKESEQMLGTTIKSGNIK* 1496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1885 1495 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 898 920 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 500 564 - -
Gso17g1885 1495 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Gso17g1885 1495 Coils Coil 1446 1480 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 1461 1495 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 873 888 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 636 708 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 989 1021 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 937 952 - -
Gso17g1885 1495 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1013 1464 - -
Gso17g1885 1495 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1072 1471 IPR015425 -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 474 622 - -
Gso17g1885 1495 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 682 708 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 433 450 - -
Gso17g1885 1495 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Gso17g1885 1495 PANTHER FORMIN-J 949 1488 - -
Gso17g1885 1495 PANTHER FORMIN-J 1 959 - -
Gso17g1885 1495 SMART it6_source 859 1491 IPR015425 -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 1461 1478 - -
Gso17g1885 1495 Coils Coil 661 681 - -
Gso17g1885 1495 SMART PTEN_C2_2 197 337 IPR014020 -
Gso17g1885 1495 Gene3D - 196 341 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 580 611 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 845 1081 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 854 872 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 565 579 - -
Gso17g1885 1495 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 1031 1055 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 793 833 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 416 432 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 659 681 - -
Gso17g1885 1495 Pfam Formin Homology 2 Domain 1074 1445 IPR015425 -
Gso17g1885 1495 Gene3D Formin, FH2 domain 1091 1484 IPR042201 -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 972 988 - -
Gso17g1885 1495 MobiDBLite consensus disorder prediction 406 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1885 Gso-Chr17 37723193 37738167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1885 1 402 FH2 protein (formin) Gene Family AT2G25050 71.464 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1885 - - gsj:114393863 2657.86