Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1882 ATGGAACCAACATGCGGGGATACTTCACTCGATCTTAACGTTGATCCTTCTACTATGCACATGGATGGGGCTTTGGTAGAAGAGTTGCGTCGTCTAAGTTGTGAGAACAAGAGGTTGACCCACTTGTGTGAGAACTACATGGCTCTGCAAAAGCAACTGAGCCAATTGATCAACACGAATTTTGATCAGCAATTAGACTACCCAATTGAATCTTCACGCAAGAGAAAAGCTGCCGAGAGTGATCAATGTTGTACCAACAAATTTGTTGGTGTTAGTAATAATAATGCTGAGTGCAGCTCCATCATCACTGAGGATTCATTCAAAAAGTACAAGGACTTCAACTCCTCGCCTAAGGTTTCCAAGTTTCTTGTCAAGACTGAAGCATCTAACAATAGCTTATATGTGATGGACGGATATCAATGGAGGAAATATGGTCAGAAAGTCACTAGGGATAACCCTTCTCCTAGAGCTTACTTCAGGTGCTCCTTTGCCCCAAGCTGCCCCGTGAAAAAAAAGTCTTCACAAAACAAGATCAAGTTATCAAATTTTTCTAATGTATCTCATCACCGAATGATCATTTGGGTGCAAAGGAGTTTAGAGGACCCTACAATACTTGTTACAACGTATGAAGGAGAGCATAACCATGGTCATCAAAGAGCTGAAATATCACTTGTCTCAAACCAAAGTGAAGCCCTTCCTCCTCTTAAAGGGTCAAGTCCTGTTTCCTCACCTAATACAGCGACAATTCGAAGTGCTGTTTGCCCCACCGTAACGCTTGATTTGGTCAAGTCAGGATTGGTTGAATTTGAAAGTGCCCAAAAGTCCTCTATCCAGCAATTTTTGGTTCAACAAATGGCTACTTCTTTGACAAGGGATCCCAATTTCACAACAGAACTTGCCACTGCCATTTCAGGAAAAATTCTAGAGGCCCAATGGTGA 939 0.4207 MEPTCGDTSLDLNVDPSTMHMDGALVEELRRLSCENKRLTHLCENYMALQKQLSQLINTNFDQQLDYPIESSRKRKAAESDQCCTNKFVGVSNNNAECSSIITEDSFKKYKDFNSSPKVSKFLVKTEASNNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKSSQNKIKLSNFSNVSHHRMIIWVQRSLEDPTILVTTYEGEHNHGHQRAEISLVSNQSEALPPLKGSSPVSSPNTATIRSAVCPTVTLDLVKSGLVEFESAQKSSIQQFLVQQMATSLTRDPNFTTELATAISGKILEAQW* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1882 312 Pfam WRKY DNA -binding domain 137 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g1882 312 Gene3D WRKY domain 119 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g1882 312 SMART WRKY_cls 135 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g1882 312 ProSiteProfiles WRKY domain profile. 130 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g1882 312 SUPERFAMILY WRKY DNA-binding domain 133 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g1882 312 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 311 IPR044810 GO:0003700
Gso17g1882 312 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR-RELATED 11 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1882 Gso-Chr17 37692981 37694757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1882 7 309 WRKY Transcription Factor Family AT1G80840 40.752 3.59e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso17g1882 WRKY 2.7e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1882 - - gsj:114392768 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0898 14 10694668 10696489 Gso17g1882 17 37692981 37694757 GST