Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1874 ATGATAACTTGGAACCTTTTGCACGCAAGAATAAGCTGTATACACGCAAGAATAGCACTATTATTTCTTCATTTTCTATTGTTGTTGTTGGTCAAAGAAGTAGCACCTGAGAACCCTGAATATTCAACCTGTGATATGGGGTACCTCAATTCAGTTCTGTCCTCTTCAAGCCAGGTTCATGCTGCAGAAGATTCACCTGTCAGTGGAGGGGGCCTCAGTCAGAATGGAAAATTCAGCTATGGGTATGCTAGCTCCCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAAAATTGATGGTGTTGATGGTGAAATTGTTGGCCTTTTTGGAGTTTTTGATGGCCATGGTGGTGCTCGTGCTGCCGAGTATGTCAAGCAAAACCTATTTAGCAATTTGATCAGTCATCCTAAATTCATTTCTGACACCAAATCTGCAATAGCTGATGCATATAACCACACCGACTCTGAATTTCTGAAATCTGAAAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGAAATGCCATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGAGGCGAAGGATTGAAGATGCAGGTGGTTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGAGTTCTTGCTGTTTCACGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAGGTTGATAGCTCTCTTGAGTTTCTTATATTGGCCAGTGATGGGCTATGGGATGTCGTCTCAAATGAGGAAGCTGTTGCTATGATTAAACCAATTGAGGACGCAGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAGCGAGGTAGTTCTGACAACATTACCTGTGTTGTTGTGCGCTTTTTGTCAAACCAAGGTGCCTCTTCTCATAGTAACTCTGGCTAA 1017 0.4336 MITWNLLHARISCIHARIALLFLHFLLLLLVKEVAPENPEYSTCDMGYLNSVLSSSSQVHAAEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETKIDGVDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYNHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERRRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMQEAYQRGSSDNITCVVVRFLSNQGASSHSNSG* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1874 338 ProSitePatterns PPM-type phosphatase domain signature. 110 118 IPR000222 GO:0043169
Gso17g1874 338 SMART PP2C_SIG_2 74 325 IPR001932 -
Gso17g1874 338 Pfam Protein phosphatase 2C 108 318 IPR001932 -
Gso17g1874 338 SUPERFAMILY PP2C-like 73 325 IPR036457 -
Gso17g1874 338 PANTHER ALPHABET, ISOFORM E-RELATED 48 334 - -
Gso17g1874 338 SMART PP2C_4 69 323 IPR001932 -
Gso17g1874 338 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 48 334 - -
Gso17g1874 338 CDD PP2Cc 78 325 IPR001932 -
Gso17g1874 338 Gene3D - 71 331 IPR036457 -
Gso17g1874 338 ProSiteProfiles PPM-type phosphatase domain profile. 79 325 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1874 Gso-Chr17 37543984 37549237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1874 46 337 PP2C-type Phosphatase Gene Family AT4G31750 90.753 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1874 K17506 - gmx:547661 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0909 14 11114026 11119280 Gso17g1874 17 37543984 37549237 GST