Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1852 ATGAGTAATTTACTAAAACCTGAGAATTGTGTTATGTTGAAAGAAGCCGTAATCGATGATAGTGATGTTGTCAAAGGAATTGTGGAATATGCACAGAGAAATCGCGTCAATACTATAGTCGTTGGTGCAACTCACTCGTGTAAGAGTACTTTGGCACGAACTCTGAACCTGAGGAGTGGAAGCAAGACACATTCACATAGAAGAGGGAGCACCAATGGAAGATCAGAAAGATCAACTCTACTTGAAATGCCAAGGTGTTCTTCAGCTGGTCAGTCAACGAATCAGAGGTCACTATTTAGCCCCAGCTCGGTTGAAAGTGATTCTCCATCAGATTCCTTAGGAGATTTGGAAGCTGCGATGAAAATGTTGAGGCTCAAATTGAAGCAAACTATGGACATGTACAGCTCAGCCCAAAACAAGGCTAAGGAGATTAACCAATGGAAGGAGGAACGTATATCTGAGGAAGCTACTAAGTTGCCTAAAGAGGCAGCTCTAGAACCGGTAGAAATGGAGAAAGTTAAAGCTCAAGCTGCCTTGGAAGCAGCTGAGGAAGCCATTAAGATGGTTGAAAAGGAAGCACAAAAAAGATTTCAGTTAGAGGTCAAGGCTAGGAGAGAGGCACAAGAGAAGGATAGAACATTAAATCGGTTGATCAACAACGATACTAGGTACAGAAAATACAGCATAAAGGATATTGAAGAGGCTACTCAAAAGTTCTCTCCATCATTGAAAGTAGGTGAAGGTGGATATGGACCTGTGTTTAGAGGCCAACTTGATCACACTCCGGTTGCAATCAAAATTTTAAACCCTGAAGCTTCGCATGGAAGGAGGCAGTTCCAACAAGAGGTTGAGATATTATGCAGCATAAGGCATCCTAACATGGTCCTCCTCCTTGGTGCGTGTCCTGAGTACGGATGCTTAGTGTATGAGTACTTGGAGAATGGCAGCTTAGAAGATAGATTGTTGATGAAAAATAATAGCCCTCCAATTCCATGGTGGAAACGTTTTGAAATAGCTGCTGAAATTGCAACTGCACTCCTTTTCCTTCACCAAACAAAGCCAGAGCCAATTGTGCACCGGGACCTTAAACCCTCCAACATTCTGTTGGACAAGAACTTTGTGAGCAAAATAAGTGATGTAGGCCTTGCAAGATTAGTTCCACCTTCTGTGGCTGATTCTGTCACACAATATCACTTGACTGCAGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTACCAACAAACAGGAAGGTTAACAAAAAAATCAGACATTTATTCCTTGGGGATAATGCTACTACAAATCATCACAGCCAAGCCTCCAATGGGGCTTGCACACCACGTTAAGAGGGCAATTGAGAAGGAAACATTCTCAGAAATGCTTGATATTATGATCAGTGATGTGCCACTGGAAGAGGCTCTAGCATTTGCCAAACTCTCATTGAGTTGTGCAGAGCTCAGCAAAAAGGACAGGCCTGATCTTGCAACAGTTGTGGTGCCGGAGCTTAACCGTTTAAGGGACTTTGGATTGACATTTCAGAAAAATTAG 1548 0.427 MSNLLKPENCVMLKEAVIDDSDVVKGIVEYAQRNRVNTIVVGATHSCKSTLARTLNLRSGSKTHSHRRGSTNGRSERSTLLEMPRCSSAGQSTNQRSLFSPSSVESDSPSDSLGDLEAAMKMLRLKLKQTMDMYSSAQNKAKEINQWKEERISEEATKLPKEAALEPVEMEKVKAQAALEAAEEAIKMVEKEAQKRFQLEVKARREAQEKDRTLNRLINNDTRYRKYSIKDIEEATQKFSPSLKVGEGGYGPVFRGQLDHTPVAIKILNPEASHGRRQFQQEVEILCSIRHPNMVLLLGACPEYGCLVYEYLENGSLEDRLLMKNNSPPIPWWKRFEIAAEIATALLFLHQTKPEPIVHRDLKPSNILLDKNFVSKISDVGLARLVPPSVADSVTQYHLTAAAGTFCYIDPEYQQTGRLTKKSDIYSLGIMLLQIITAKPPMGLAHHVKRAIEKETFSEMLDIMISDVPLEEALAFAKLSLSCAELSKKDRPDLATVVVPELNRLRDFGLTFQKN* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1852 515 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 62 514 - -
Gso17g1852 515 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 8 62 - -
Gso17g1852 515 SUPERFAMILY Protein kinase-like (PK-like) 219 498 IPR011009 -
Gso17g1852 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Gso17g1852 515 PANTHER OS02G0152300 PROTEIN 62 514 - -
Gso17g1852 515 PANTHER OS02G0152300 PROTEIN 8 62 - -
Gso17g1852 515 ProSiteProfiles Protein kinase domain profile. 239 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1852 515 SMART serkin_6 239 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1852 515 Pfam Protein tyrosine and serine/threonine kinase 244 498 IPR001245 GO:0004672|GO:0006468
Gso17g1852 515 Gene3D Phosphorylase Kinase; domain 1 216 311 - -
Gso17g1852 515 MobiDBLite consensus disorder prediction 56 113 - -
Gso17g1852 515 Coils Coil 165 192 - -
Gso17g1852 515 Coils Coil 200 220 - -
Gso17g1852 515 Gene3D Transferase(Phosphotransferase) domain 1 312 509 - -
Gso17g1852 515 MobiDBLite consensus disorder prediction 74 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1852 Gso-Chr17 37251281 37255944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1852 31 509 Receptor kinase-like Gene Family AT5G12000 60.279 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso17g1852 PK_Tyr_Ser-Thr 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1852 - - gsj:114391722 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0933 14 11876254 11889337 Gso17g1852 17 37251281 37255944 GST