Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1849 ATGACAGGTTTTGTGATAGTTGAGGGGTGGGAGGGTAACTTTTTGTCCTACCTAGATAGGGATTTCGATGGAGGAGATGTCCTTTGCGGTTGCAGTGCCATTAAGAGTTCAGATGATTGTCATGATAGTGGCAATTTGGAGGATGAAGTTGGTATTGCGGAAGTCATACCACCAATTCAAGATAGGGAAGGAGAGAGTCCTATGTTGGATATGATATCACAAAATAGAAGCACTTTGGTTGCTGGTGATGAAGAGTTAACCATGGAAATTGAGGAGGATTCGTTGTCGTTTGAAGGTGACCAGTTTGTTGATAGCTCGTGTTCTCTTTCGGTAGTCAGTGAGAACAGTAGTGTGTGTGGAGAGGAGTCATTCTGTTTTGATGCTACTTCAGATGTTGGGACACCGTGTTCCACAGATGTAGAGAAGAGCATCTGTGCTGTCAATATTGTTGCCGAGGCTGTTGATTTAGGGGAGTCAAATGTCGACACTGATATTATGACTGATCCTCTTGCTGTGGCAGTGAGCCTTGAAGAAGAGTCTGGAGTTAGATCTGGTCCAAAGTCTTCTGCTGTTGATCTTCATCAGTTGCCTCAGGAAAAAGGGGTGAGTGGAACAGTTGGTCGGAGTGTTTTTGAATTGGATTATACCCCACTTTATGGATTCATATCTTTGTGTGGAAGAAGACCTGAGATGGAAGATGCAGTTGCAACTGTACCTCGGTTTCTGAAAATTCCTATTCAAATGCTAATTGGTGATCGGGTAATTGATGGAATAAACAAGTGTTTTAATCAGCAGATGACCCATTTCTTTGGAGTCTATGATGGTCATGGTGGCTCTCAGGTTGCAAACTATTGTCGTGATCGTACCCATTGGGCCTTGGCTGAGGAAATAGAATTTGTGAAGGAAGGTCTAATCAGTGGAAGTATGAAGGATGGTTGTCAAAATCAGTGGAAAAAGGTTTTCACCAATTGTTTCTTAAAGGTCGATGCTGAAGTTGGTGGGAAAGTTAATAATGAACCTGTTGCCCCAGAAACTGTTGGCTCCACTGCTGTTGTTGCTGTTATTTGTGCTTCTCATATCATAGTTGCAAATTGTGGTGATTCACGAGCAGTTCTATGTCGTGGCAAAGAACCCATGGCATTATCAGTGGACCATAAACCTAACCGAGATGATGAATATGCAAGAATTGAGGCAGCTGGAGGAAAGGTGATTCAATGGAATGGCCATCGTGTATTTGGTGTTCTTGCAATGTCAAGGTCTATTGGCGATAGATATTTGAAGCCATGGATTATTCCAGAACCAGAAGTTACGTTCGTTCCCCGTACAAAAGACGATGAGTGTCTCATTCTGGCCAGCGATGGTCTGTGGGATGTTATGACAAATGAGGAGGTGTGTGACCTCGCTCGGAAACGAATAATTCTCTGGTACAAGAAAAATGGCTTGGAACAACCCTCTTCAGAAAGGGGAGAGGGAATTGATCCTGCTGCACAAGCAGCAGCAGAATACCTATCAAACCGCGCCCTTCAGAAAGGAAGCAAAGATAACATCAGTGTGATTGTGGTTGATTTGAAACCTCAAAGAAAATATAAGAGCAAGACATGA 1602 0.432 MTGFVIVEGWEGNFLSYLDRDFDGGDVLCGCSAIKSSDDCHDSGNLEDEVGIAEVIPPIQDREGESPMLDMISQNRSTLVAGDEELTMEIEEDSLSFEGDQFVDSSCSLSVVSENSSVCGEESFCFDATSDVGTPCSTDVEKSICAVNIVAEAVDLGESNVDTDIMTDPLAVAVSLEEESGVRSGPKSSAVDLHQLPQEKGVSGTVGRSVFELDYTPLYGFISLCGRRPEMEDAVATVPRFLKIPIQMLIGDRVIDGINKCFNQQMTHFFGVYDGHGGSQVANYCRDRTHWALAEEIEFVKEGLISGSMKDGCQNQWKKVFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAVICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFVPRTKDDECLILASDGLWDVMTNEEVCDLARKRIILWYKKNGLEQPSSERGEGIDPAAQAAAEYLSNRALQKGSKDNISVIVVDLKPQRKYKSKT* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1849 533 Gene3D - 205 533 IPR036457 -
Gso17g1849 533 ProSiteProfiles PPM-type phosphatase domain profile. 218 523 IPR001932 -
Gso17g1849 533 CDD PP2Cc 219 523 IPR001932 -
Gso17g1849 533 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 88 533 - -
Gso17g1849 533 PANTHER ALPHABET, ISOFORM E-RELATED 88 533 - -
Gso17g1849 533 SMART PP2C_4 206 521 IPR001932 -
Gso17g1849 533 ProSitePatterns PPM-type phosphatase domain signature. 269 277 IPR000222 GO:0043169
Gso17g1849 533 SUPERFAMILY PP2C-like 211 525 IPR036457 -
Gso17g1849 533 Pfam Protein phosphatase 2C 257 516 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1849 Gso-Chr17 37194893 37200252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1849 115 533 PP2C-type Phosphatase Gene Family AT1G17550 54.651 1.41e-159 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1849 K14497 - gmx:100791754 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0946 14 12284220 12289321 Gso17g1849 17 37194893 37200252 GST