LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso17g1845	ATGTTAGGCACTCCTCACACCCTCATACTCCTTCTCTTCCTCTTCCTCATCACCACCTTCTCCCACTCCCTTGTCTTCAACATAACCAACTTCGACGACCCTGCCGCCGCCACCGCCATATCCTACGAGGGCGACGGAAGAACCACCAACGGCTCCATCGACCTCAACAAAGTCAGCTACCTCTTCCGCGTCGGAAGGGCCATCTACTCCAAACCCCTCCACCTGTGGGACCGGTCCTCCGACCTTGCCATCGACTTCGTCACGCGTTTCACCTTCTCTATTGAGAAGTTGAACTTAACCGAAGTCGCCTATGGAGACGGCTTCGCGTTTTACTTGGCTCCGTTGGGGTACCGGATTCCGCCGAACTCCGGCGGCGGAACCTTTGGGCTTTTCAACGCTACCACCAACAGCAACCTCCCCGAGAATCATGTTGTCGCGGTGGAGTTCGACACTTTCATCGGCTCCACCGACCCGCCGACGAAGCACGTCGGCGTGGACGACAACTCCCTTACCTCGGCTGCGTTCGGAAACTTCGACATCGACGACAACCTCGGAAAGAAGTGCTACACCTTGATCACTTACACCGCCTCCACTCAAACACTCTTCGTTTCTTGGTCCTTCAAAGGAAAACCAGCATCCACAAACCACAACGACAATTCTTCTTCTTTTTCTTACCAAATTGACCTCAAGAAAATTCTCCCGGAGTGGGTCAACATTGGATTCTCAGCCTCCACGGGACTTTCCACCGAAAGAAACACTATTTATTCATGGGAGTTCAGTTCATCTTTGAATGGTTCCCCTGCGGATTTCGAGAATGTGAAACTAAAGCACCAAAGCTCAAAGCTTGCTTTGATTCTTGCCGTTCTTTGTCCACTGGTTCTGCTCTTTGTCTTGGCTAGTCTGGTTGCTGTTTTCTTGATAAGGAAAAAACGAAGAAGCCATGATGATTGCATGTTATATGAAGTTGGTGATGACGAGCTAGGACCCACATCGGTTAAGTTTGATTTGGACAAAGGAACCATTCCAAGAAGATTCGAGTACAAAGAACTCGTGGACGCCACGAACGGGTTTTCAGACGATAGAAGGCTTGGACAAGGAGCTTCAGGGCAAGTCTACAAGGGTGTCTTGAGCTACCTAGGAAGAGTTGTTGCCGTGAAGAGAATCTTCGCGGACTTCGAGAATTCCGAGAGAGTTTTCACCAACGAGGTCAGAATAATAAGCCGTTTGATTCACAAGAACTTGGTCCAATTCATAGGGTGGTGTCACGAAGAAGGCGAGTTCTTATTAGTCTTCGAGTACATGCCAAACGGGAGCCTCGATTCTCATTTGTTCGGGAACAAGAGAGTACTAGAGTGGCATCTAAGGTACAAAATTGTGTTGGGCGTGGTGAACGCGCTTCATTATCTTCACGAAGACGCAGAGCAATGCGTGCTTCATAGGGATATAAAATCCGCGAACGTGTTGCTGGACACGGAGTTCAACACAAAGGTGGGGGATTTCGGCATGGCGAAGTTGGTGGATCCGAGGCTGAGGACTCAGAGGACGGGAGTGGTGGGAACCTATGGTTATTTAGCGCCTGAGTATGTTAACGTGGGGAGGGCGAGTAGGGAATCGGATATCTACAGTTTTGGAGTGGTATCGCTGGAGATGGCGAGTGGGAGGAGGACTTACCAGGATGGAGAGTTTCATGTTTCTTTGATGAATTGGGTGTGGCAACTTTATGTTGAAGGGGAGATTATGAGGGCTGCTGATGAGAAACTGAACAATGAGTTTGAGGTGGATCAAATGAGGAGTTTGCTTGTGGTGGGGCTTTGGTGCACCAATCCGAATGATAAAGAGAGACCTAAGGCTGCACAAGTTATTAAGGTTTTGAACCTTGAGGCTCCTTTGCCTGTTCTTCCACTTGACATGTATGAACGTGCTCCTCCTATGGAGATCATTAGGATGCCACATCATCCCAGTGGTAAGAATCATTCTGGGATGTCCACACCCATTACTTCTAGTCTTGTGAGTGTTGGTCGATGA	2025	0.4923	MLGTPHTLILLLFLFLITTFSHSLVFNITNFDDPAAATAISYEGDGRTTNGSIDLNKVSYLFRVGRAIYSKPLHLWDRSSDLAIDFVTRFTFSIEKLNLTEVAYGDGFAFYLAPLGYRIPPNSGGGTFGLFNATTNSNLPENHVVAVEFDTFIGSTDPPTKHVGVDDNSLTSAAFGNFDIDDNLGKKCYTLITYTASTQTLFVSWSFKGKPASTNHNDNSSSFSYQIDLKKILPEWVNIGFSASTGLSTERNTIYSWEFSSSLNGSPADFENVKLKHQSSKLALILAVLCPLVLLFVLASLVAVFLIRKKRRSHDDCMLYEVGDDELGPTSVKFDLDKGTIPRRFEYKELVDATNGFSDDRRLGQGASGQVYKGVLSYLGRVVAVKRIFADFENSERVFTNEVRIISRLIHKNLVQFIGWCHEEGEFLLVFEYMPNGSLDSHLFGNKRVLEWHLRYKIVLGVVNALHYLHEDAEQCVLHRDIKSANVLLDTEFNTKVGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYVNVGRASRESDIYSFGVVSLEMASGRRTYQDGEFHVSLMNWVWQLYVEGEIMRAADEKLNNEFEVDQMRSLLVVGLWCTNPNDKERPKAAQVIKVLNLEAPLPVLPLDMYERAPPMEIIRMPHHPSGKNHSGMSTPITSSLVSVGR*	675

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso17g1845	674	Gene3D	Phosphorylase Kinase; domain 1	342	433	-	-
	Gso17g1845	674	SUPERFAMILY	Protein kinase-like (PK-like)	341	637	IPR011009	-
	Gso17g1845	674	Gene3D	-	22	273	-	-
	Gso17g1845	674	ProSiteProfiles	Protein kinase domain profile.	357	633	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso17g1845	674	PANTHER	PUTATIVE-RELATED	8	638	-	-
	Gso17g1845	674	SMART	serkin_6	357	630	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso17g1845	674	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	477	489	IPR008271	GO:0004672\|GO:0006468
	Gso17g1845	674	SUPERFAMILY	Concanavalin A-like lectins/glucanases	24	263	IPR013320	-
	Gso17g1845	674	MobiDBLite	consensus disorder prediction	652	674	-	-
	Gso17g1845	674	ProSitePatterns	Protein kinases ATP-binding region signature.	363	386	IPR017441	GO:0005524
	Gso17g1845	674	ProSitePatterns	Legume lectins alpha-chain signature.	233	242	IPR000985	-
	Gso17g1845	674	CDD	lectin_legume_LecRK_Arcelin_ConA	26	263	IPR001220	GO:0030246
	Gso17g1845	674	Pfam	Legume lectin domain	24	265	IPR001220	GO:0030246
	Gso17g1845	674	ProSitePatterns	Legume lectins beta-chain signature.	145	151	IPR019825	-
	Gso17g1845	674	PANTHER	-	8	638	-	-
	Gso17g1845	674	Gene3D	Transferase(Phosphotransferase) domain 1	434	628	-	-
	Gso17g1845	674	MobiDBLite	consensus disorder prediction	656	674	-	-
	Gso17g1845	674	Pfam	Protein kinase domain	358	622	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso17g1845	Gso-Chr17	37113365	37115868	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso17g1845	9	637	Receptor kinase-like Gene Family	AT5G10530	44.930	0.0	529

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Gso17g1845		Pkinase	1.7e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso17g1845	-		-	gmx:100791220	1315.83