Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1836 ATGGCTGCACCACATGATAATGATCCAAGAAACATTGTTTCCATTTCAAGGATTGTGTCTGTGCATCCAAAGCTTGTGCAACCTCAGAGGGTTTTGACCCTTTCAAATTTGGATAGACAGTGTCCAAATCTCATGCACTTGGTGTTCTTTTACAATAACCTTCCTCACCAAACTCTGAAGGACTTGTCCCTCAATTCAGTGTTCTCCAACTTGAAATCTGGCTTGGAAGAGACCTTGACTCTGTGGTATCCTAGTGCAGGTAGGCTTGGGACAAATCAAAGTGATGGCAAGCTCAATTTGTGGTGCAACAACCAGGGTGCAGTTCTGGCAGAGGCTGAAACCTGTGTTAAAATATCACAACTTGGAAACCTCTCTGAGTACAATGAATTCTTTGAGAAGCTGGTTTATAAGCCAGATTTTGATAAGAATTTCTCAAACATGCCTTTGATTGTTGCTCAGGTTACTAAATTTGGTTGTGGAGGGTATTCAATTGGTATTGGAACAAGCCACTCATTATTTGACGGGCCAGCAACCTATGACTTCTTGTATGCATGGGCCTCAAATTCTGAAATTGTGAAAGGAAGAAGCAGATCTGATGATGAGCTTCCAAAACCAGTGCATGAGAGAGGGATAATTCTGAGTGGTAGTCTTCAAGCCACAAGAGGGACTATAAATTTTCCTTCAGATTCAAGTTCAAATGTTAAACAAGTTAGGGCCATGGCAATAGATCACTTATATCAACTTATAATGCAAACAGCTAGTGGACAAAATGGCTTCCCTATGCAAATTGGAGGACCCTCTAATCCAAAGAAGTGTGTTCTTAAAACCTATCATCTTTCAGGTGATATGATTGAAGACTTGAAAAGGAAACACTTTCCCATGCAAAGAGGTTCACTTCCTTTCTCAACCTTTGAGGTTCTTGCGGCTCACCTTTGGAAGGCAAGGACCAAAGCATTAGGGGTGAAGAAAGAGAAGCTAGTATGTTTCCAATTCGCGGTGGACATAAGGAACAAGATGACACCTCCATTGCCAAAATCCTTCAGTGGAAACGCTTATGTTCTCGCCTCCATTATGATGTCAGTGGCAGAATTGGAACAAACAAGCCATGAATTCATCGTTGATAAAATAAGAGAAGCCAAAAACAGTGTAAACCATAACTATGTGAAAGCCTACGTTGGTGCCCTAGATGGACCACAACAAGGTTCTTCACTCCCTCCACTCAAGGAGCTAACTTTGGTCTCTGATTGGACAAGAATGCCCTTTCACAACATTGAGTTCTTTCGTGGAAAAGCAACCTATGCATCCCCTTTGGCCACTCCTATGCCACAGGTTGCATATTTCATGCAAAGCCCTAGTGACCACAAGGGCGTTGACGTGAGGATTGGCTTTGAAGCGGAAAACATAAGTGCTTTTAGTGAATGCTTTTTGAGCATGGCGTGA 1440 0.4229 MAAPHDNDPRNIVSISRIVSVHPKLVQPQRVLTLSNLDRQCPNLMHLVFFYNNLPHQTLKDLSLNSVFSNLKSGLEETLTLWYPSAGRLGTNQSDGKLNLWCNNQGAVLAEAETCVKISQLGNLSEYNEFFEKLVYKPDFDKNFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYDFLYAWASNSEIVKGRSRSDDELPKPVHERGIILSGSLQATRGTINFPSDSSSNVKQVRAMAIDHLYQLIMQTASGQNGFPMQIGGPSNPKKCVLKTYHLSGDMIEDLKRKHFPMQRGSLPFSTFEVLAAHLWKARTKALGVKKEKLVCFQFAVDIRNKMTPPLPKSFSGNAYVLASIMMSVAELEQTSHEFIVDKIREAKNSVNHNYVKAYVGALDGPQQGSSLPPLKELTLVSDWTRMPFHNIEFFRGKATYASPLATPMPQVAYFMQSPSDHKGVDVRIGFEAENISAFSECFLSMA* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1836 479 Gene3D - 11 221 IPR023213 -
Gso17g1836 479 PANTHER BRASSINOSTEROID-RELATED ACYLTRANSFERASE 1 10 478 - -
Gso17g1836 479 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 478 - -
Gso17g1836 479 Pfam Transferase family 20 474 - -
Gso17g1836 479 Gene3D - 252 477 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1836 Gso-Chr17 36803574 36810227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1836 13 476 Monolignol Biosynthesis Gene Families AT5G48930 23.418 2.92e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1836 K15400 - gmx:100779295 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0961 14 12811371 12816925 Gso17g1836 17 36803574 36810227 GST