Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso17g1828 | ATGGCCAGACCACAACAGCGTTACCGAGGTGTCCGACAAAGGCATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCCATATTGAAGACTAGGATATGGCTTGGTACATTTGAAACAGCTGAGGATGCTGCTAGGGCCTATGATGAAGCAGCTAGGCTAATGTGTGGTGCAAGGGCAAGAACAAACTTCCCTTTCAATCCAAATGTGTCACACTCATCATCTTCTAGTTCAAAGCTTCTCTCAGCAACTTTGACTGCAAAACTTCACAGGTGCTACATGGCTTCTTTGCAAGTGACAAGACAAGCTTTGGCATCTGAGTCTCAGAGAACACCACCCTCAGTGCAAAATGCAACAACCTCCACAACCACACCAATTAGCAACAACTTCAGTGTGAAGAGTGAGCAAACTCATGCAGTGTTGCCACATAAGAGACCAGAGGAGGAGCAAGAGTCAGAGGCAAATAGGGGTGTGAAAAGGGTTAAGGCTGTGGAAAATGTTCCTCTGCAATTCAAGCCTCTTGAGGAAGATCACATAGAGCAAATGATTGAGGAGCTTCTTGATTATGGATCTATTGAACTCTGCTCTGTCATTTCACCCCAGGCCCTCTAA | 609 | 0.4663 | MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGARARTNFPFNPNVSHSSSSSSKLLSATLTAKLHRCYMASLQVTRQALASESQRTPPSVQNATTSTTTPISNNFSVKSEQTHAVLPHKRPEEEQESEANRGVKRVKAVENVPLQFKPLEEDHIEQMIEELLDYGSIELCSVISPQAL* | 203 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso17g1828 | 202 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE | 1 | 196 | - | - | |
Gso17g1828 | 202 | Pfam | AP2 domain | 7 | 56 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g1828 | 202 | MobiDBLite | consensus disorder prediction | 103 | 158 | - | - | |
Gso17g1828 | 202 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 1 | 196 | - | - | |
Gso17g1828 | 202 | SMART | rav1_2 | 7 | 70 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g1828 | 202 | ProSiteProfiles | AP2/ERF domain profile. | 7 | 64 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g1828 | 202 | Gene3D | AP2/ERF domain | 6 | 65 | IPR036955 | GO:0003700|GO:0006355 | |
Gso17g1828 | 202 | CDD | AP2 | 6 | 64 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g1828 | 202 | MobiDBLite | consensus disorder prediction | 137 | 158 | - | - | |
Gso17g1828 | 202 | PRINTS | Ethylene responsive element binding protein signature | 8 | 19 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g1828 | 202 | PRINTS | Ethylene responsive element binding protein signature | 30 | 46 | IPR001471 | GO:0003700|GO:0006355 | |
Gso17g1828 | 202 | SUPERFAMILY | DNA-binding domain | 7 | 65 | IPR016177 | GO:0003677 | |
Gso17g1828 | 202 | MobiDBLite | consensus disorder prediction | 103 | 135 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso17g1828 | Gso-Chr17 | 36564727 | 36566032 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso17g1828 | 1 | 202 | AP2-EREBP Transcription Factor Family | AT5G25190 | 61.058 | 3.14e-77 | 228 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Gso17g1828 | AP2 | 6.7e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso17g1828 | - | - | gmx:100785918 | 378.252 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso14g0968 | 14 | 13122804 | 13124406 | Gso17g1828 | 17 | 36564727 | 36566032 | GST | |
Gso17g1828 | 17 | 36564727 | 36566032 | Gso4g0538 | 4 | 5198619 | 5199946 | PCT | |
Gso17g1828 | 17 | 36564727 | 36566032 | Gso6g0532 | 6 | 4927669 | 4928903 | PCT | |
Gso4g0538 | 4 | 5198619 | 5199946 | Gso17g1828 | 17 | 36564727 | 36566032 | PCT | |
Gso6g0532 | 6 | 4927669 | 4928903 | Gso17g1828 | 17 | 36564727 | 36566032 | PCT |