Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1818 ATGTGGAGAGAGAGAGCGTTATTGGTGATCCTGCTACTGCTTCTAGTCCAGCAAATTTGTGCTACCAAGAAGCAAGATCATGGTTGCCCCCTTTCTTCCTGCGGCAAAATCACCAACATAACTTACCCATTTCGATTAAAAGGCCAACCTAAAAGCTGCGGCGACAATAGGTATGAGCTAGCTTGTGAAAACAATGTTACTGTGTTACATTTGTACTCTGGAAAATATCATGTGCAGGCAATCAACTACAATAATTTCACTATCCGAGTGGTTGATCCAGGAGTCGATCAACAAACAAATTGCTCCTCCCTTCCTCGCTATTTCTTGTCTCGCTCCAATTTCACTGATACTTACAATTATAGATACAACATGGATCCATACCAAGCTGGTGAATATTCAGGTCGTAGTAAATGGGACAGGCTTGCTTTCCAGCATATAGTGTATATGAATTGTAGCAATCCAGTGACTCAGAATGGTAACTATGTGGATACTGCATCATACGTCAACTGGGACTCCAAAGACAAGTACATATACGCTATTGCTGGTGACTTACAAGCAGAGGACTTCCAAGTTGGTTGTCACGTAAAGCTGGTTGCTCTGACATCTTGGTGGGGTTTGAATATAAACAATTATTCCTACGCTGCCATGCACACGGGGCTAGTCTATGGATTTGAGATTTCATGGATGCGCCTCATATGTGACCAGCACTGTCCAAGTAAACACGGCTGCGGCTACTGCTATTTCGACTCTGTCAGCCAGGAGCTTGATTATTGGAACGGGGATTCATTATGGACTATTCTCCAAATTTTCATTATGTTATGGGCATGGAAAATTTTGTTGACAGTGCCACTGTTTATTGTGATTTTGACGTGTAAATGGAGAAAAAGACATATGTCAATGTTTGAAAGTATTGAAAATTATCTAGAACAAAATAACTTGATGCCTATTAGATATTCATACAAGGAAGTTAAGAAGATGGCGGGAGGTTTTAAAGACAAGTTGGGTGAAGGAGGATATGGCTCTGTGTTCAAGGGAAAATTGCGTAGCGGGTCTTGTGTGGCAATAAAGATGTTAGGTAAATCAGAAGGAAATGGCCAAGATTTTATTAGTGAAGTTGCAACCATTGGAAGAACATATCATCAAAATATAGTACAACTAATTGGATTTTGTGTTCATGGGTCAAAACGTGCTCTTGTCTATGAATTCATGCCCAATGGATCTCTTGATAAATTTCTTTTTTCCAAAGATGAAAGTATACATTTAAGCTATGATAGAATATATAATATATCAATTGGAGTGGCTCGTGGAATTGCTTATCTCCACTATGGGTGTGAGATGCAGATTTTGCACTTTGATATCAAGCCCCACAACATTCTACTAGATGAAAACTTCACCCCAAAGGTCTCTGACTTTGGATTGGCAAAATTATATCCAATAGATAATAGCATTGTCCCAAGGACAGCAGCAAGAGGAACAATTGGATATATGGCTCCAGAATTGTTTTATAATAATATTGGGGGAATATCCCATAAGGCTGATGTTTATAGCTATGGAATGCTTTTGATGGAGATGGCAAGCAAGAGGAAAAATCTAAATCCCCATGCAGAGCGTTCAAGTCAACTTTTCTTTCCCTTTTGGATTTATAATCATATTGGAGATGAGGAAGATATAGAAATGGAAGATGTCACAGAGGAGGAAAAGAAAATGATAAAGAAAATGATCATAGTTGCACTTTGGTGTATACAATTGAAACCAAATGACCGTCCCTCAATGAACAAAGTAGTCGAAATGCTTGAAGGAGACATTGAAAACTTAGAAATACCTCCAAAGCCAACTCTGTATCCAAGTGAAACGATCACATAA 1863 0.3897 MWRERALLVILLLLLVQQICATKKQDHGCPLSSCGKITNITYPFRLKGQPKSCGDNRYELACENNVTVLHLYSGKYHVQAINYNNFTIRVVDPGVDQQTNCSSLPRYFLSRSNFTDTYNYRYNMDPYQAGEYSGRSKWDRLAFQHIVYMNCSNPVTQNGNYVDTASYVNWDSKDKYIYAIAGDLQAEDFQVGCHVKLVALTSWWGLNINNYSYAAMHTGLVYGFEISWMRLICDQHCPSKHGCGYCYFDSVSQELDYWNGDSLWTILQIFIMLWAWKILLTVPLFIVILTCKWRKRHMSMFESIENYLEQNNLMPIRYSYKEVKKMAGGFKDKLGEGGYGSVFKGKLRSGSCVAIKMLGKSEGNGQDFISEVATIGRTYHQNIVQLIGFCVHGSKRALVYEFMPNGSLDKFLFSKDESIHLSYDRIYNISIGVARGIAYLHYGCEMQILHFDIKPHNILLDENFTPKVSDFGLAKLYPIDNSIVPRTAARGTIGYMAPELFYNNIGGISHKADVYSYGMLLMEMASKRKNLNPHAERSSQLFFPFWIYNHIGDEEDIEMEDVTEEEKKMIKKMIIVALWCIQLKPNDRPSMNKVVEMLEGDIENLEIPPKPTLYPSETIT* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1818 620 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 7 245 - -
Gso17g1818 620 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 253 619 - -
Gso17g1818 620 SMART serkin_6 328 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1818 620 ProSiteProfiles Protein kinase domain profile. 328 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1818 620 Gene3D Transferase(Phosphotransferase) domain 1 403 612 - -
Gso17g1818 620 Pfam Wall-associated receptor kinase galacturonan-binding 29 92 IPR025287 GO:0030247
Gso17g1818 620 Gene3D Phosphorylase Kinase; domain 1 302 402 - -
Gso17g1818 620 SUPERFAMILY Protein kinase-like (PK-like) 313 599 IPR011009 -
Gso17g1818 620 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Gso17g1818 620 Pfam Protein tyrosine and serine/threonine kinase 330 598 IPR001245 GO:0004672|GO:0006468
Gso17g1818 620 PANTHER RUST RESISTANCE KINASE LR10-RELATED 253 619 IPR045874 GO:0004672
Gso17g1818 620 PANTHER RUST RESISTANCE KINASE LR10-RELATED 7 245 IPR045874 GO:0004672
Gso17g1818 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1818 Gso-Chr17 36283806 36287398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1818 9 614 Receptor kinase-like Gene Family AT5G38260 37.102 2.71e-111 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso17g1818 PK_Tyr_Ser-Thr 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1818 - - gmx:100781099 1211.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0980 14 13676145 13681097 Gso17g1818 17 36283806 36287398 GST