Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1812 ATGTGGCTTTCAATTTTTCTTCTTCTCTGTTTTCAAGGTCTTGCGAGATGTGGAAAGAGTTGCAAACTAAGGTGGCTGAATTACCTAAGGCCAAACCTCAAAAGAGGAAACTACACCAAGGGAGAGGAGGAAACTATTATCAAGCTGCACCGACATCTGGGTAATAGGTATGCAACAGAGCATAGATGTGGAGTAGTTGTTAAAGGACCAAATCTGAGTGGAAATATATCAGGAACAGAGCCATTGAAGGACAACCGCATACTTTTAAAAGCAGAAGCTTTAGATGATTCCCATGAAGCAAGGAACATTGCTGCTGTTGTTAATGAGTTGTCCAAGGAAATAACAAAAAATTTGGTTTCTCATCCTGTGAATGCTAAATGTACTGCAGAAGGGAAGAACATAGCAAATGTAGTCCTTTTAAGAGGCTGTGGCATTCGAATTGAGGTCTGTTCTTTCAGTTTATTTCATAATTGA 474 0.3945 MWLSIFLLLCFQGLARCGKSCKLRWLNYLRPNLKRGNYTKGEEETIIKLHRHLGNRYATEHRCGVVVKGPNLSGNISGTEPLKDNRILLKAEALDDSHEARNIAAVVNELSKEITKNLVSHPVNAKCTAEGKNIANVVLLRGCGIRIEVCSFSLFHN* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1812 157 SUPERFAMILY Homeodomain-like 2 58 IPR009057 -
Gso17g1812 157 Pfam 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 56 124 IPR004456 GO:0003824|GO:0046537
Gso17g1812 157 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 33 IPR017930 -
Gso17g1812 157 PANTHER COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE 55 154 IPR004456 GO:0003824|GO:0046537
Gso17g1812 157 Gene3D - 4 34 - -
Gso17g1812 157 PANTHER BNAA06G39690D PROTEIN 55 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1812 Gso-Chr17 36169457 36171580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1812 12 58 MYB Transcription Factor Family AT1G79180 70.213 2.75e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1812 - - gsj:114408116 287.73