Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1810 ATGTCGAACGGTCTTGAATGGGTTAATTTTGTGAGTGCTGTTGTGCAATGGTGCTGTGAAAACCTTTTATCACCAGTCATGTCTCGCAAACAAAACCTCCTATGTGAACTGCATACAAAGAAAGGTACTTGGAAGATTGTCGTGCGAATAACTGATATGTGGCGTCTTAACAAACATAATGGTCGACAATCCATTGAGATGGTGTTGATGGACCATATGGGTACAAAGATTGGGGCAACTCTATGGCAAGAATTGTTCCCTGAATTTGAACCCAAGTTGCGTTGTGGTGGTGCATATGTTATTCAGAACATGAAGGTTGTTGATACTCATTCTGACTACAAAGTGAATGCAATTAAATATTTGGTTTATTTTGTGAAGACAACGTCTGTCAAAGAGGTGGACAGACCTGAGATTCCTCCTAATGTTCATGCCATTACTTCATTTGCTGATATAATTTCAGGCGTTGCAAAACCTGATACTTTAGTTGTGATTGAACGCAAAACAGTTAATTCAGCATATAGAGTGACTGTCAAGTTGAGAGACAACAGTCATGTTGAGATCTTCATGACTATGTGGGAGGAATATGCTCTTCAGCTGGATGATGCTATTGAGAAAAACCATTTTGTGCAAAAGCCATTGGTTGTTATACTAACTCTTGCTAAGATCAAAGAACCCAAGGTATCCCCTCAGTGTACAGAATATAAAGCATGGTTTGAAGTTGTATGTGAATGTTTACGTGTGCCATTTTATATTGGCGGTCTAGATGATGAGGGTGGTGTTTCTCAGTCACAGTCTACCCAGAATTGCCAAGATAAGTTTTTGCATAATGCTCAAATAGTGAGCTTTGGTGAAATAAAGACTCTGCAACAGGTAAGTCCATACTGTACAACCACTTTTGATCCATTAAAAATAGGTGCAGCCTGCCATTCATGCCAGAATCATGTTACTCACACTATTCCAAGGTATAAGTTAGTTGTCAAGATGGAACAGAATGGAGAGAAGGCGAACTTCCATTTTTGGGATGCAGTATGTATCAAAATATTTGGTAAAACTGCAGAGGAATGTCGTCAAGAGTTGATTGCGAGTGGTGATGAGATCAAGGTGTTCCCTGCGTGTGTTGATCAATTGTTGGGTAAAACTTGGGTTGATGAACAATGTATAAGCAACAAGTCAGCCGATGTTGGTGTTGCATCTTCATCACAACAAGATTATCATCCTACATCATCTGAATATGATCCTGGAAATGCTGCCTTTGTAACTCCTGCAAAAAGAACGTCCGATCAGCAAGGAAGTAGTCAGTTTGATAGTGACGACTTCACAACATATGAGCTATCGACCAACAAGCATATAAAAGATGAGTAA 1362 0.3957 MSNGLEWVNFVSAVVQWCCENLLSPVMSRKQNLLCELHTKKGTWKIVVRITDMWRLNKHNGRQSIEMVLMDHMGTKIGATLWQELFPEFEPKLRCGGAYVIQNMKVVDTHSDYKVNAIKYLVYFVKTTSVKEVDRPEIPPNVHAITSFADIISGVAKPDTLVVIERKTVNSAYRVTVKLRDNSHVEIFMTMWEEYALQLDDAIEKNHFVQKPLVVILTLAKIKEPKVSPQCTEYKAWFEVVCECLRVPFYIGGLDDEGGVSQSQSTQNCQDKFLHNAQIVSFGEIKTLQQVSPYCTTTFDPLKIGAACHSCQNHVTHTIPRYKLVVKMEQNGEKANFHFWDAVCIKIFGKTAEECRQELIASGDEIKVFPACVDQLLGKTWVDEQCISNKSADVGVASSSQQDYHPTSSEYDPGNAAFVTPAKRTSDQQGSSQFDSDDFTTYELSTNKHIKDE* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1810 453 Gene3D - 260 400 IPR012340 -
Gso17g1810 453 SUPERFAMILY Nucleic acid-binding proteins 34 134 IPR012340 -
Gso17g1810 453 Pfam Domain of unknown function DUF223 66 161 IPR003871 -
Gso17g1810 453 MobiDBLite consensus disorder prediction 421 439 - -
Gso17g1810 453 SUPERFAMILY Nucleic acid-binding proteins 307 382 IPR012340 -
Gso17g1810 453 Gene3D - 34 126 IPR012340 -
Gso17g1810 453 CDD RPA1_DBD_A_like 45 130 - -
Gso17g1810 453 Gene3D - 127 239 IPR012340 -
Gso17g1810 453 MobiDBLite consensus disorder prediction 398 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1810 Gso-Chr17 36033133 36037750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1810 32 195 Core DNA Replication Machinery Family AT5G45400 21.667 8.48e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1810 - - gsj:114391708 929.858