Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1800 ATGTTTGTCCTAGAAAATGGTGTGAAGAACAAGGGGGAAGACCCAAGGCTTCAAGCAATCTCTCAAGCCATCAGAGTGGTGCCTCACTTTCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGTTGTTGGATCACAACGCGTTTAAAGACGCGGTTGACATTTTTGTTGATCGTTACAGAGACATGGATATTTCTGTTGTTGCCGGAGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCAATTGCGTTAGGCATTGGTGCAAAGTTTGCTCCTTTATGCAAACCTGGAAAGCTACCAGGTGAAGTAATTTCAGAAAAATATGTTCTAGAATATGGAACTGATTGCTTGGAGATGCATGTTGGTGCTGTCCAACAAAATGAACGGGTCATAATTATCGATGATTTGGTGGCTACAGGTGGAACTATGTCAGCAGCAATTAGACTTCTAGAACGTGCTGATGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTGTCTGATCTTAAGGTACGCTGCAAGCTTAATGGAAAGCCACTTTATATCCTTGTGGAGCCACGCCAAGTAGAAAATGGTTTTTGA 585 0.4222 MFVLENGVKNKGEDPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHNAFKDAVDIFVDRYRDMDISVVAGVEARGFIFGSSIALGIGAKFAPLCKPGKLPGEVISEKYVLEYGTDCLEMHVGAVQQNERVIIIDDLVATGGTMSAAIRLLERADAEVVECACVIGLSDLKVRCKLNGKPLYILVEPRQVENGF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1800 194 Gene3D - 7 187 IPR029057 -
Gso17g1800 194 Hamap Adenine phosphoribosyltransferase [apt]. 20 187 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gso17g1800 194 CDD PRTases_typeI 53 186 IPR000836 -
Gso17g1800 194 SUPERFAMILY PRTase-like 23 179 IPR029057 -
Gso17g1800 194 TIGRFAM apt: adenine phosphoribosyltransferase 21 185 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gso17g1800 194 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 12 191 - -
Gso17g1800 194 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 12 191 - -
Gso17g1800 194 Pfam Phosphoribosyl transferase domain 45 165 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1800 Gso-Chr17 35271943 35275327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1800 13 186 PRT Gene Family AT1G27450 67.816 1.72e-83 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1800 K00759 - gmx:100775389 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0996 14 14179120 14183156 Gso17g1800 17 35271943 35275327 GST
Gso17g1800 17 35271943 35275327 Gso4g0563 4 5446965 5452073 PCT
Gso17g1800 17 35271943 35275327 Gso6g0559 6 5180805 5185686 PCT
Gso4g0563 4 5446965 5452073 Gso17g1800 17 35271943 35275327 PCT
Gso6g0559 6 5180805 5185686 Gso17g1800 17 35271943 35275327 PCT