Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1797 ATGAATATTACACTTTCAGAGTCAAGAATGTCTAAAGAAGTTATTGCTACTCAATCACCTGCTCCTTTTGAGTATGAGATCTTGGATAGCGATGCTGAAGTCCTTAGAACTGTTAGAGCCTCATCGAATCACACGAATCCATGGATTGAACCTGAAAGGTTGAAACTTAGACACAGAATTGGCCGAGGCCCCTTTGGTGATGTCTGGTTAGCAACTCATCATCAGTCAACTGAAGATTATGACGAGTACCATGAAGTTGCTGCTAAGATGTTGCATCCAATCAAAGAGGATCATGTGAAGATTGTATTAGAGAAGTTCAATGAATTGTATTTTAAGTGCCAAGGAGTTGCTAGCATTTCCTGGCTACATGGAATTTCAGTCTTAAATGGAAGGATATGCATCATTATGAATTTGTATGAGGGTTCAATGGGTGACAAGATGGCAGGACTCAAAGAAGGAAGGATTTCATTGCATGATGTCCTAAGGTATGGAATCAATCTGGCTCAAGGTGTTCAGGAACTTCACTCTAAAGGGATCTTCATTCTGAACCTTAAACCTTTTAATGTTCTTCTCAATGGTAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCTAGCCTTTTGCTTGGCTCATCATTCATAAGCTCAGACATGGCTAAGAGGTTTGGAACTCCCAATTACATGGCTCCAGAGCAATGGGAACCAGAGGTCAGAGGTCCTATATCTTTTGAAACAGATTCTTGGGGATTCGGTTGCACCATTGTCGAAATGTTGACCGGTAATCAACCTTGGTATGGATGTCCTGTTGGCAGAATATACCAGTCTGTTGTTGAAAAGCATGAAAAACCCAATATTCCAAGTGGCCTTCCTTCTTCAGTTGAGAATGTCCTCAGTGGATGCTTTGAGTATGATTTGAGGAATCGCCCTTTAATGGTAGATATTCTGAGTGTCTTTCAAAGTGCTCTGAATGAACTGACCAATAATCATGGAGAATGGAGATATCAAGGAAATGGGAAAGTTATTCCAAAATCAGGTAGCACTGGCTACACAGAGTGGTTCCTCTCAAAGGATCATCTTCAGGTGGGCGACGTGGTCCGATCTAGAAAGCCTTCCAATGCATGCAGACCTCAAAACATGGACATCCCAGAAGGAACTGTCGTTGGTTTAGAGCGAAATGCAGATCACGGATTCGCCCTCGTGAGGGTCCATGGAATTCATGACCCTGTTAAAATTCATATGTCAACTCTTGAACGTGTCACATTTGGCTTAGTAGCTGGTGATTGGGTCCGCCTGAGGGATGAAAATGAGAAACACTCACTGGTGGGCATTCTACATGCCGTCAATCGCGATGGTAGAGTGGCTGTTGGATTTCTCGGGCTGCAAACTCTCTGGAATGGAAACTCTTCGGAACTCGAAATCGCGGAATCATACTGCATCGGCCAGTTTGTCAGGCTCAAAGACAGCCTTTCAAGTCCTCGATTCGAATGGCGTCGCAAAAGGGGAGGAGCCTCGGCCGCTGGCAGGATTTCATGGATTCTACCAAATGGATGCTTGGTTGTCAAGTTCCCAGGAATGCTCCCTTTCGGAAATGAACCAAGCACCTACTTGGCTGATCCCTCCGAGGTGGAAGTGGTTGAGTTCAAGACATGTCCTGGAATGATAGAGAAGTACCAACATGTAGAGGATCATCACTGGGCAATTAGGCCTGTTCTAATTGCAATTGGTCTATTCACTGCTCTCAAACTAGGCATATCAGTTGGAAAGAAAGTGAGGAGGAACAACAAGGTAACTGCAATAGAAACTGAAACTCAATATCTTGATGGTCAAAATCAAAATGCTGCCACCTCTGCTACAACTACAACTACTACAAAGAAACCTTCCACTTCCAGTGCTACAATACCAGTTAGCTCAATGTGGGTTCCTGCAGTTGCTAATATGATTTTTAAGGAAAGTGTTACCTCGTCCAATGGTCGGTAG 1977 0.435 MNITLSESRMSKEVIATQSPAPFEYEILDSDAEVLRTVRASSNHTNPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLHPIKEDHVKIVLEKFNELYFKCQGVASISWLHGISVLNGRICIIMNLYEGSMGDKMAGLKEGRISLHDVLRYGINLAQGVQELHSKGIFILNLKPFNVLLNGNDQAILGDVGIPSLLLGSSFISSDMAKRFGTPNYMAPEQWEPEVRGPISFETDSWGFGCTIVEMLTGNQPWYGCPVGRIYQSVVEKHEKPNIPSGLPSSVENVLSGCFEYDLRNRPLMVDILSVFQSALNELTNNHGEWRYQGNGKVIPKSGSTGYTEWFLSKDHLQVGDVVRSRKPSNACRPQNMDIPEGTVVGLERNADHGFALVRVHGIHDPVKIHMSTLERVTFGLVAGDWVRLRDENEKHSLVGILHAVNRDGRVAVGFLGLQTLWNGNSSELEIAESYCIGQFVRLKDSLSSPRFEWRRKRGGASAAGRISWILPNGCLVVKFPGMLPFGNEPSTYLADPSEVEVVEFKTCPGMIEKYQHVEDHHWAIRPVLIAIGLFTALKLGISVGKKVRRNNKVTAIETETQYLDGQNQNAATSATTTTTTKKPSTSSATIPVSSMWVPAVANMIFKESVTSSNGR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1797 658 PANTHER OS06G0639500 PROTEIN 10 654 - -
Gso17g1797 658 MobiDBLite consensus disorder prediction 610 632 - -
Gso17g1797 658 Gene3D Transferase(Phosphotransferase) domain 1 140 344 - -
Gso17g1797 658 SUPERFAMILY Protein kinase-like (PK-like) 51 319 IPR011009 -
Gso17g1797 658 Gene3D Phosphorylase Kinase; domain 1 30 137 - -
Gso17g1797 658 PANTHER OS06G0639500 PROTEIN 10 654 - -
Gso17g1797 658 Pfam Protein tyrosine and serine/threonine kinase 54 316 IPR001245 GO:0004672|GO:0006468
Gso17g1797 658 ProSiteProfiles Protein kinase domain profile. 54 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1797 Gso-Chr17 35195574 35202809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1797 38 325 MAP Kinase Kinase Kinase AT2G17700 23.973 5.53e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Gso17g1797 PK_Tyr_Ser-Thr 2.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1797 - - gsj:114393396 1314.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1000 14 14421248 14427151 Gso17g1797 17 35195574 35202809 GST
Gso17g1797 17 35195574 35202809 Gso4g0564 4 5468282 5472618 PCT
Gso17g1797 17 35195574 35202809 Gso6g0560 6 5201376 5205816 PCT
Gso4g0564 4 5468282 5472618 Gso17g1797 17 35195574 35202809 PCT
Gso6g0560 6 5201376 5205816 Gso17g1797 17 35195574 35202809 PCT