Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso17g1793 | ATGACATATAATTGGGTGTTGTGGACGAAAACCATGGGAAGACAGTGGTCTCTCTTCAGTGCCATGGATACCCTCTTGTTGTGTATCCTTCTTTCTTCTGAAGTTGTTTTGACTAGTTATCAAAACGTTGGCAAAGTTTATCCGGGAATTGAAGGTTCTCAAATGAATTGGATTGACAGGTATGGAATTTTGCTTGAGTCATATAATGGAGAATTTGGCTTTGGTTTGGTCACCACTGCAAATGACTCCACATTGTTTCTACTAGCAATAGTCCACATGCACACCCCCAAGTTGGTTTGGGTTGCAAATAGGGAACTTCCTGTTTCCAATTCTGATAAATTTGTGTTTGATGAGAAGGGCAATGTCATTTTGCATAAAGGAGAAAGTGTGGTGTGGTCTACATATACAAGTGGCAAGGGTGTTTCTTCAATGGAATTGAAGGACACTGGAAACTTGGTTTTGCTAGGGAATGATAGTAGAGTGATTTGGCAAAGTTTCAGCCACCCTACAGATACCTTGTTGCCAATGCAAGATTTCATTGAGGGAATGAAACTTGTCAGTGAACCTGGTCCTAACAACTTGACCTATGTTCTTGAGATTGAATCTGGCAGTGTCATTCTCTCCACTGGTTTACAAACTCCACAGCCTTATTGGTCTATGAAGAAGGATAGCCGCAAAAAAATTGTCAACAAAAATGGTGATGTGGTGGCTTCAGCTACTCTTGATGCAAACTCCTGGAGGTTCTATGATGAGACTAAATCCTTGTTGTGGGAATTGGATTTTGCTGAAGAATCAGATGCAAATGCCACTTGGATTGCAGTTTTGGGAAGTGATGGCTTCATCACTTTCTCCAATCTTCTAAGTGGAGGGTCAATTGTTGCTTCACCAACAAGAATACCACAAGATTCTTGCAGCACTCCAGAACCTTGTGATCCCTATAACATATGCAGTGGTGAAAAAAAGTGCACCTGCCCTTCTGTTCTTAGCTCTAGGCCTAATTGCAAACCCGGGTTTGTCTCTCCTTGCAACTCAAAAAGCACCATTGAGCTTGTAAAAGCTGATGATAGACTCAATTACTTTGCACTTGGGTTTGTTCCACCCTCTTCAAAGACTGATTTGATTGGTTGCAAAACCTCTTGCAGTGCAAATTGCTCATGCCTTGCTATGTTCTTCAACAGCAGTTCAGGGAACTGTTTCCTGTTTGACAGGATTGGAAGCTTTGAGAAATCTGACAAAGATTCGGGTTTAGTGTCCTATATTAAGGTGGTATCTAGTGAAGGAGACACTAGAGACAGTGGAAGCAGCAAAATGCAGACAATAGTTGTTGTGATCATTGTCATAGTAACATTGTTTGTCATTTCTGGTATGCTATTCGTGGCACATAGATGCTTCAGGAAAAAGGAAGATTTGCTTGAGTCTCCTCAAGAGGATTCAGAAGATGACAGTTTCTTGGAGAGTTTAACTGGCATGCCAATCCGTTACAGCTACACTGATCTAGAAACTGCAACAAGTAACTTCTCTGTGAGGCTTGGAGAAGGGGGTTTCGGTTCAGTATATAAAGGAGTTCTACCAGATGGGACTCAACTAGCTGTGAAGAAGTTGGAAGGAATTGGCCAAGGGAAGAAAGAGTTCAGAGTTGAAGTAAGCATTATAGGGAGCATTCATCACCACCATTTGGTAAGGCTTAAAGGTTTCTGTGCTGAAGGGTCTCATAGAGTTCTTGCTTATGAGTACATGGCTAATGGTTCATTGGATAAATGGATATTCAACAAGAACAAAGAGGAATTTGTGTTGGATTGGGATACAAGGTATAACATAGCACTTGGAACAGCAAAAGGACTTGCTTATCTACATGAAGATTGTGACTCAAAGATTATTCATTGTGACATCAAACCAGAAAATGTGCTCCTAGATGATAATTTCAGGGTCAAGGTTTCTGATTTTGGTTTGGCTAAGCTCATGACACGTGAGCAAAGCCATGTTTTCACAACACTTAGAGGCACTAGAGGGTATCTTGCACCTGAGTGGATCACAAACTGTTCCATATCAGAGAAAAGTGATGTTTATAGCTATGGTATGGTGTTGCTGGAGATCATTGGGGGGAGGAAAAACTATGATCCCAGTGAAACTTCAGAGAAATCTCATTTCCCATCTTTTGCTTTTAAGATGGTGGAAGAAGGGAATGTGAGAGAGATTCTTGACTCAAAGGTGGAAACTTATGAAAATGATGAAAGGGTTCACATTGCTGTGAATGTTGCATTGTGGTGCATACAGGAAGACATGTCTCTTAGGCCTTCCATGACCAAAGTTGTTCAAATGTTAGAGGGTCTATGCACTGTTCATAAGCCACCAACTTGTTCTGTCCTAGGTTCTCGGTTTTATTCTACTAGTGAGGTTGGCACTTCTTCAGGGCCATCAGATTGTAACAGTGAAGCCAATCTTTCTGCTGTTAGGCTTTCAGGGCCAAGATAA | 2472 | 0.413 | MTYNWVLWTKTMGRQWSLFSAMDTLLLCILLSSEVVLTSYQNVGKVYPGIEGSQMNWIDRYGILLESYNGEFGFGLVTTANDSTLFLLAIVHMHTPKLVWVANRELPVSNSDKFVFDEKGNVILHKGESVVWSTYTSGKGVSSMELKDTGNLVLLGNDSRVIWQSFSHPTDTLLPMQDFIEGMKLVSEPGPNNLTYVLEIESGSVILSTGLQTPQPYWSMKKDSRKKIVNKNGDVVASATLDANSWRFYDETKSLLWELDFAEESDANATWIAVLGSDGFITFSNLLSGGSIVASPTRIPQDSCSTPEPCDPYNICSGEKKCTCPSVLSSRPNCKPGFVSPCNSKSTIELVKADDRLNYFALGFVPPSSKTDLIGCKTSCSANCSCLAMFFNSSSGNCFLFDRIGSFEKSDKDSGLVSYIKVVSSEGDTRDSGSSKMQTIVVVIIVIVTLFVISGMLFVAHRCFRKKEDLLESPQEDSEDDSFLESLTGMPIRYSYTDLETATSNFSVRLGEGGFGSVYKGVLPDGTQLAVKKLEGIGQGKKEFRVEVSIIGSIHHHHLVRLKGFCAEGSHRVLAYEYMANGSLDKWIFNKNKEEFVLDWDTRYNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDDNFRVKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNCSISEKSDVYSYGMVLLEIIGGRKNYDPSETSEKSHFPSFAFKMVEEGNVREILDSKVETYENDERVHIAVNVALWCIQEDMSLRPSMTKVVQMLEGLCTVHKPPTCSVLGSRFYSTSEVGTSSGPSDCNSEANLSAVRLSGPR* | 824 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso17g1793 | 823 | SUPERFAMILY | Protein kinase-like (PK-like) | 482 | 775 | IPR011009 | - | |
Gso17g1793 | 823 | SMART | blect_4 | 56 | 169 | IPR001480 | - | |
Gso17g1793 | 823 | ProSitePatterns | Protein kinases ATP-binding region signature. | 510 | 533 | IPR017441 | GO:0005524 | |
Gso17g1793 | 823 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 | 12 | 823 | - | - | |
Gso17g1793 | 823 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 95 | 220 | IPR036426 | - | |
Gso17g1793 | 823 | SMART | serkin_6 | 504 | 774 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso17g1793 | 823 | MobiDBLite | consensus disorder prediction | 800 | 816 | - | - | |
Gso17g1793 | 823 | ProSiteProfiles | Protein kinase domain profile. | 504 | 777 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso17g1793 | 823 | Gene3D | - | 61 | 168 | IPR036426 | - | |
Gso17g1793 | 823 | CDD | STKc_IRAK | 510 | 777 | - | - | |
Gso17g1793 | 823 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 625 | 637 | IPR008271 | GO:0004672|GO:0006468 | |
Gso17g1793 | 823 | PIRSF | SRK | 19 | 821 | IPR024171 | GO:0004674 | |
Gso17g1793 | 823 | Pfam | D-mannose binding lectin | 98 | 178 | IPR001480 | - | |
Gso17g1793 | 823 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 12 | 823 | - | - | |
Gso17g1793 | 823 | CDD | B_lectin | 65 | 169 | IPR001480 | - | |
Gso17g1793 | 823 | Pfam | Protein kinase domain | 508 | 772 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso17g1793 | 823 | MobiDBLite | consensus disorder prediction | 800 | 823 | - | - | |
Gso17g1793 | 823 | Gene3D | Phosphorylase Kinase; domain 1 | 471 | 578 | - | - | |
Gso17g1793 | 823 | Gene3D | Transferase(Phosphotransferase) domain 1 | 579 | 784 | - | - | |
Gso17g1793 | 823 | ProSiteProfiles | Bulb-type lectin domain profile. | 50 | 167 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso17g1793 | Gso-Chr17 | 35139491 | 35142962 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso17g1793 | 431 | 784 | Receptor kinase-like Gene Family | AT5G20050 | 43.182 | 1.28e-95 | 305 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Gso17g1793 | Pkinase | 1.1e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso17g1793 | - | - | gmx:100787500 | 1664.43 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso14g1005 | 14 | 14557441 | 14560868 | Gso17g1793 | 17 | 35139491 | 35142962 | GST | |
Gso17g1793 | 17 | 35139491 | 35142962 | Gso4g0571 | 4 | 5536356 | 5539467 | PCT | |
Gso17g1793 | 17 | 35139491 | 35142962 | Gso6g0568 | 6 | 5270751 | 5274063 | PCT | |
Gso4g0571 | 4 | 5536356 | 5539467 | Gso17g1793 | 17 | 35139491 | 35142962 | PCT | |
Gso6g0568 | 6 | 5270751 | 5274063 | Gso17g1793 | 17 | 35139491 | 35142962 | PCT |