LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso17g1773	ATGGATTCTCAAATACTCAACTCATTAGCCCTTATCTTGCCCTTTTTCCTCTTCATGATTGTGGTGCTGAAACTAGGGAGAAAACTCAAGAAAACTGAGCCATCTCTGAACATACCCCCAGGACCATGGAAACTGCCTATTGTAGGAAACTTACACCAACTTGTTACATCTTCACCACATAAAAAATTCAGAGACTTGGCCAAAATATATGGACCCATGATGCATCTTCAACTTGGGGAGATCTTCACAATCGTTGTTTCCTCGGCAGAGTATGCTAAGGAGATACTGAAAACCCATGATGTCATCTTTGCATCAAGGCCTCACTTTCTAGTTTCAGAAATAATGTCCTATGAAAGCACAAACATTGCTTTTTCACCTTATGGAAATTATTGGAGGCAGGTACGTAAAATATGCACCTTGGAGCTTCTCTCCCAAAAACGTGTCAACTCATTCCAGCCAATTAGAGAAGAAGAGCTCACCAATCTTGTTAAAATGATTGGTTCACAAGAAGGGTCTTCCATCAACCTCACAGAAGCAGTGCACTCATCAATGTATCATATCATTACAAGAGCTGCGTTTGGCATAAGGTGCAAAGACCAAGATGAATTCATATCAGCGATAAAGCAAGCTGTGCTAGTTGCAGCAGGTTTCAACATAGGAGATTTGTTTCCTTCTGCTAAATGGCTTCAACTTGTTACTGGTTTGAGGCCTACCCTTGAGGCGCTTTTTCAACGAACTGATCAGATACTAGAAGACATCATCAATGAACACAGAGAGGCAAAGTCAAAAGCCAAAGAAGGCCATGGTGAAGCAGAGGAAGAAGGTTTGTTAGATGTTCTCCTAAAATTCGAGGATGGTAATGATAGTAACCAGAGCATTTGCTTAACTATTAACAATATCAAGGCAGTAATCGCGGACATCTTCGGTGGTGGAGTAGAGCCAATAGCTACTACCATAAATTGGGCAATGGCAGAGATGATAAGGAATCCAAGAGTGATGAAGACAGCACAGGTTGAGGTGAGAGAGGTATTCAATATTAAAGGAAGGGTTGATGAAACTTGCATCAATGAACTCAAATATTTGAAATCTGTTGTCAAAGAGACCCTAAGGTTGCACCCACCAGCTCCTCTTATACTTCCTAGAGAATGTCAAGAGACGTGTAAGATTAATGGGTATGACATACCAGTAAAAACCAAGGTATTCATTAATGCTTGGGCAATTGGAAGAGATCCAAACTACTGGAGTGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGACAGCTCTGTTGATTACAAAGGGGGTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGTCCCGGCATCACCTTTGGTTTAGTAAATGTTGAACTAACTCTTGCGTTTTTGTTGTATCACTTGGATTGGAAGCTTCCTAATGGAATGAAAAATGAGGACTTTGACATGACTGAGAAATTTGGAGTGACTGTTGCAAGAAAAGATGACATATACTTGATACCTGTTACTTCTCGTCCTTTCCTGGGAAATGGTGCAGAAAGCATGGAAGCAGTGCAGTCAAAGAAGGTTGAGTAG	1581	0.4073	MDSQILNSLALILPFFLFMIVVLKLGRKLKKTEPSLNIPPGPWKLPIVGNLHQLVTSSPHKKFRDLAKIYGPMMHLQLGEIFTIVVSSAEYAKEILKTHDVIFASRPHFLVSEIMSYESTNIAFSPYGNYWRQVRKICTLELLSQKRVNSFQPIREEELTNLVKMIGSQEGSSINLTEAVHSSMYHIITRAAFGIRCKDQDEFISAIKQAVLVAAGFNIGDLFPSAKWLQLVTGLRPTLEALFQRTDQILEDIINEHREAKSKAKEGHGEAEEEGLLDVLLKFEDGNDSNQSICLTINNIKAVIADIFGGGVEPIATTINWAMAEMIRNPRVMKTAQVEVREVFNIKGRVDETCINELKYLKSVVKETLRLHPPAPLILPRECQETCKINGYDIPVKTKVFINAWAIGRDPNYWSEPERFYPERFIDSSVDYKGGNFEYIPFGAGRRICPGITFGLVNVELTLAFLLYHLDWKLPNGMKNEDFDMTEKFGVTVARKDDIYLIPVTSRPFLGNGAESMEAVQSKKVE*	527

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gso17g1773	526	Coils	Coil	254	274	-	-
Gso17g1773	526	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	442	451	IPR017972	GO:0005506\|GO:0016705
Gso17g1773	526	Pfam	Cytochrome P450	39	491	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso17g1773	526	Gene3D	Cytochrome P450	31	502	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso17g1773	526	PANTHER	CYTOCHROME P450 71B11-RELATED	10	507	-	-
Gso17g1773	526	PANTHER	CYTOCHROME P450 FAMILY 71 PROTEIN	10	507	-	-
Gso17g1773	526	PRINTS	P450 superfamily signature	310	327	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso17g1773	526	PRINTS	P450 superfamily signature	363	374	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso17g1773	526	PRINTS	P450 superfamily signature	440	449	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Gso17g1773	526	PRINTS	E-class P450 group I signature	67	86	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso17g1773	Gso-Chr17	34635138	34638135	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso17g1773	4	504	Cytochrome P450	AT1G13110	40.430	2.41e-133	395

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso17g1773	-		-	gmx:100818508	1038.1

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso14g1015	14	15028140	15030991	Gso17g1773	17	34635138	34638135	GST

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