Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1762 ATGGGTCCTCCTAGGCTTGCATCTATGGGACCTTTTGGAGGAATAATTCAAGATGTCAAAGGAAGGGTTGAATGTTATAAACATGATTGGGCTAGTGCAATCTGTTCTGGCATTAGGATATTGGCTCCAACTTTCTACATATTTTTTGCGTCTGCTCTTCCTGTTATTGCTTTTGGAGAGCAACTTAACAGGGATACAGGCGGAAGCTTGAGCACATTGGAAACTTTGGCATCAACTGCCATTTGTGGAATAATCCACTCAATATTTGGTGGTCAACCTTTGTTGATTTTGGGAGTTGCTGAACCAACTGTTATAATGTACACTATTCTTTATGAGTTTTGCACAAAAACGCCAGAGTTAGGTGCCAAGATGTTTCTGCCGTGGGCTGGTTGGGTTTGTGTGTGGACATCATTCCTGCTGATTATTCTTGCAATTTTCAACGCATGCACAATCATCACAAGGTTCACAAGAATTGCAGAGGAATTATTTGGCATGTTGATTACTGTCCTTTTCTTTCAAGAGGCTATAAAGGGAATCATAGGTGAGTTCAACACCCCTAAGGATGGAAATCTTTTGTTAGAGGAAAATCAATTCCATTGGCGGTATGCAAATGGACTACTTGCAATCATTTTATCTTTTGGACTACTTATCACTGCCACGATGAGCAGAAAAGCAAGAACATGGAAATATGGATCAGGGTGGCTACGAGGTTTCATTGCAGATTATGGGGTTCCAATGATGTTAGTGATTTGGACTGGACTATCTTATACTCTACCAGGAAAAATTCCATCTGCAGTTCCTAGAAGGCTAGTTTGTCCACTTCCATGGGAATCTACTTACCACTGGACAGTAGTAAAGGATATGGGGAAGGTACCCTTGGGATATATCTTTGGGGCATTTATTCCAGCTGTGATGATAGCAGGTTTATACTTTTTTGATCATAGTGTAGCTTCTAAGATGGCTCAACAGAAGGAATTTAATCTTCAAAAACCATCTGCCTACCACTATGATATTTTACTACTTGGTATAATGACTCTGATTTGCGGTATCCTTGGCCTTCCTCCATCAAATGGAGTTCTTCCTCAATCCCCCATGCATACAAAGAGTTTGACAGTTCTTAGGAAGCAGTTGATCCGAAAGAAGGTGGTAAAAAGTGTCAAGCAACAAGGAAGCAACTCTGAATTATATGGAAAGATGCAAGTTGTGTTTGTAGAAATGGATACAACACCAACAACAAAAGAGTTGGAGAATTTGAAGGAGGCTGTAATGAAATCTAATGAAAAGAATGCTGCAAAGGAAAATTTTGATCCTGATAAACATATAGATGCCTATCTACCTGTACGAGTTAATGAGCAAAGAATGAGCAACTTATTACAGTCTCTTTTGATTGGCCTATCAATTTTTTCCGTTAATATCATCAAAATGATACCCACTTCAGTTCTATGGGGATATTTTGCATACATGGCAATTGATAGTCTCCCAGGGAATCAATTTTGGGAAAGGATATCGCTTCTGTTCATCCCACCAAGTCGACGCTATAAGATATTGGAAGGTTATCATGCCTCGTTTGTGGAGTCAGTACCATTCAAGACCATAGCTGTATTCACAATATTACAGTTTGTGTATTTCCTAATCTGTTTTGGAGTGACATGGATACCTGTAGGAGGAATACTTTTTCCATTACCATTTTTCCTTCTCATAACTATAAGAGAGCATTTGCTTCCAAAGATATTCAAACCTAATCATCTTCAAGAACTAGATGCATCTGGGTACGAGGAAATTGTTGGTGCTCCACATATTACACATAATATACCACCAAGGGAAAAAGAGTCAAATGACCCTGACAGTGATGATATGAGCTCAGAAGATTATTATGATGCAGAGATATTGGATAAGATGACCACAAATAGGGGAGAATTGAAGCTTAGAACTGTAAGCCGAAATAATAGTAAAAGCTTCAGCTACAGCTCCAGTGAAGACATGCAACATTAG 1992 0.3911 MGPPRLASMGPFGGIIQDVKGRVECYKHDWASAICSGIRILAPTFYIFFASALPVIAFGEQLNRDTGGSLSTLETLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTILYEFCTKTPELGAKMFLPWAGWVCVWTSFLLIILAIFNACTIITRFTRIAEELFGMLITVLFFQEAIKGIIGEFNTPKDGNLLLEENQFHWRYANGLLAIILSFGLLITATMSRKARTWKYGSGWLRGFIADYGVPMMLVIWTGLSYTLPGKIPSAVPRRLVCPLPWESTYHWTVVKDMGKVPLGYIFGAFIPAVMIAGLYFFDHSVASKMAQQKEFNLQKPSAYHYDILLLGIMTLICGILGLPPSNGVLPQSPMHTKSLTVLRKQLIRKKVVKSVKQQGSNSELYGKMQVVFVEMDTTPTTKELENLKEAVMKSNEKNAAKENFDPDKHIDAYLPVRVNEQRMSNLLQSLLIGLSIFSVNIIKMIPTSVLWGYFAYMAIDSLPGNQFWERISLLFIPPSRRYKILEGYHASFVESVPFKTIAVFTILQFVYFLICFGVTWIPVGGILFPLPFFLLITIREHLLPKIFKPNHLQELDASGYEEIVGAPHITHNIPPREKESNDPDSDDMSSEDYYDAEILDKMTTNRGELKLRTVSRNNSKSFSYSSSEDMQH* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1762 663 MobiDBLite consensus disorder prediction 601 621 - -
Gso17g1762 663 Gene3D Helical hairpin bin 22 64 - -
Gso17g1762 663 PANTHER ANION EXCHANGE PROTEIN 8 658 IPR003020 GO:0005452|GO:0006820|GO:0016020
Gso17g1762 663 Pfam HCO3- transporter family 11 184 IPR011531 GO:0006820|GO:0016021
Gso17g1762 663 Pfam HCO3- transporter family 447 537 IPR011531 GO:0006820|GO:0016021
Gso17g1762 663 Pfam HCO3- transporter family 193 376 IPR011531 GO:0006820|GO:0016021
Gso17g1762 663 PANTHER BORON TRANSPORTER 6-RELATED 8 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1762 Gso-Chr17 34285380 34303043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1762 10 646 Antiporters AT5G25430 66.512 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1762 K24194 - gmx:100808880 1298.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g1762 17 34285380 34303043 Gso4g0598 4 5762237 5767238 PCT
Gso17g1762 17 34285380 34303043 Gso6g0596 6 5501130 5506502 PCT
Gso4g0598 4 5762237 5767238 Gso17g1762 17 34285380 34303043 PCT
Gso6g0596 6 5501130 5506502 Gso17g1762 17 34285380 34303043 PCT