Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1751 ATGCCACAACAAAATGATGTTATGACAAGCCTCAGTGCCACAACAAAACCTACAGAAGTTCAATCACCATCAGTTACAAAGGCTGTTCTGCCTACAGGAATAGCAGTTTTGGTCAAGAAGATTGAGTGGGAAGAGAGGAGCAGCAAGGTTGCGTCAGAATTTATAATAAGACTGGGAAATGCAAGGCACAAGAATTTAGTCAGATTGTTGGGGTTTTGCCACAACCCGCATCTATTCTATCTTTTGTATGATTACTTGCCTAATGGGAACTTGGCTGAGAAAATGGAAATGAAATGGGATTGGGCTGCAAAATTCAGAACAGTAGTTGGAATTGCTAGAGGACTTTGCTTCCTTCACCATGAATGTTACCCAACTATACCTCATGGTGACAAAAAGGCCAGCAACATTGTATTTGATGAAAATATGGAACCCCATTTGGTAGAATTTGGGTTCAAGCAAGTATTGAGGTGGAGCAAAGGCTCATCACCCACCACAAATAAGTGGGAAACAGGTGTAGCAGTGTCTCAACTTGAATACTCAAGGGCGATAGGATCCCTCATGTATGCAATGATTAGTACTAGGCCTGATATAGCTTATGCTGTTGCTAAACTCAGTAGGTTTACAAGTAATCCTAGTTCTCATCATTGGCAAGCTATGAATAGAGTATTCAAATACTTAAAGGGAACCATTGATTATGGTTTGACATATACTGGATTTCCTTCGGTTATTGAAGGTTATTCTGATGCAAGTTGGATAACCAATATGGAGGATTATTCATCCACAAGTGGTTGGGTATTCCTCCTTGGAGGAGGTGCTATCTCTTGGGCATCCAAGAAACAGACCTGCATTACAAATTCAACAATGGAATCTGAATTTGTAGCTTTAGCAACAGCTAGTAAAGAAGCTGAGTGGCTAAGAAATCTGATCTATGAGATTCCATTGTGGCCCAAACCTATACCTCCCATGTCTATCAGAAAGCAGTAA 984 0.4055 MPQQNDVMTSLSATTKPTEVQSPSVTKAVLPTGIAVLVKKIEWEERSSKVASEFIIRLGNARHKNLVRLLGFCHNPHLFYLLYDYLPNGNLAEKMEMKWDWAAKFRTVVGIARGLCFLHHECYPTIPHGDKKASNIVFDENMEPHLVEFGFKQVLRWSKGSSPTTNKWETGVAVSQLEYSRAIGSLMYAMISTRPDIAYAVAKLSRFTSNPSSHHWQAMNRVFKYLKGTIDYGLTYTGFPSVIEGYSDASWITNMEDYSSTSGWVFLLGGGAISWASKKQTCITNSTMESEFVALATASKEAEWLRNLIYEIPLWPKPIPPMSIRKQ* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1751 327 Pfam Protein kinase domain 24 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1751 327 SMART serkin_6 18 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1751 327 Gene3D Transferase(Phosphotransferase) domain 1 10 224 - -
Gso17g1751 327 PANTHER UNNAMED PRODUCT 4 171 - -
Gso17g1751 327 SUPERFAMILY Protein kinase-like (PK-like) 24 162 IPR011009 -
Gso17g1751 327 ProSiteProfiles Protein kinase domain profile. 1 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1751 327 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 4 171 - -
Gso17g1751 327 CDD RNase_HI_RT_Ty1 244 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1751 Gso-Chr17 34008400 34036230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1751 5 158 Receptor kinase-like Gene Family AT5G51350 54.430 7.79e-48 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso17g1751 Pkinase 1.9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1751 - - gsj:114391671 674.855