Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1750 ATGGAGAGCAGTGACATATCCAGAGTTGATAGTGCAAGAGCCAGTGGCTCTAACATATGGAGGAACAACAGCATGGATGTTTTCTCAACATCTGAACGCGAAGATGACGAAGAGGCTCTCAAATGGGCAGCCATAGAGAGACTCCCGACATATCTTCGAATTCGGAGAAGCATACTCAACAATGAAGATGGGAAAGGTAGAGAGGTTGACATCAAGCAACTGGGCCTCACAGAGAGAAAGATTATTGTGGAGAGGCTTGTGAAGATAGCAGAAGAAGATAATGAAAGGTTCTTGCTGAAACTCAGGGAAAGAATGGACAGAGTTGGGCTTGATATTCCGACAATTGAAGTTAGATTTGAGCATATAAATGTGGAAGCACAAGTTTATGTTGGAGGAAGAGCACTGCCTTCAATGCTGAACTTTTTTGCTAATGTAATTGAGGGGTTCTTAAATTATCTTCACATAATTCCAAGTCCAAAGAAACCGTTGCGTATACTTCAGAATGTTAGTGGAATCATAAAGCCTCGAAGAATGACATTGCTTTTGGGGCCACCAGGTTCTGGAAAGACCACTTTGCTGTTAGCGTTGGCTGGAAAACTTGATAAAGATTTGAATCATTCAGGGAGAGTAACATACAATGGGCATGGGCTTGAAGAGTTTGTGCCACAAAGGACTTCAGCTTATATAAGTCAATATGATAACCACATTGGAGAAATGACTGTGAGAGAAACTCTGGCTTTCTCAGCTAGATGCCAAGGGGTTGGACAGAACTATGAGATGTTGGCTGAGCTACTAAGAAGAGAGAAGCATGCAAAGATTAAACCGGATCCTGATATTGATGCCTATATGAAGGCTGCAGCACTAGGAAGACAACGGACGAGCGTGGTCACTGATTATATTCTCAAGATTTTGGGACTTGAAGTGTGTGCTGACATTATGGTAGGAGATGGAATGATAAGAGGTATCTCAGGAGGGCAGAAAAAGAGAGTCACAACAGGGGAGATGCTGGTTGGACCTATAAAGGTGTTATTCATGGACGAAATATCAACTGGTTTGGACAGTTCCACAACTTTTCAAATAATCAATTCTATCCGGCAATCCATCCATATTCTGAATGGAACTGCACTTGTGTCTCTGCTACAGCCAGCACCAGAAACTTATGAACTTTTTGATGATATAATACTATTAACGGATGGACAAATCGTGTACCAAGGACCAAGAGAAAATGTGGTAGAGTTTTTCGAATCAATGGGTTTTAAGTGTCCTGAAAGAAAAGGAGTTGCTGACTTCTTGCAAGAAGTGACATCAATAAAGGATCAATGGCAATATTGGGCACGTAAAGATGAACCTTATAGCTTTGTCACTGTCAAGGAATTTACTGAAGCATTCCAGCTATTTCACATAGGTCAAAATCTTGGAGAGGAGCTAGCCTGTCCATTTGACAAGTCTAAATGCCATCCAAATGTATTGACCACAAAGAAGTATGGTGTTAACAAAAAGGAGCTGCTGAGGGCTTGTGCCAGCAGGGAATTTTTGCTTATGAAGAGAAATTCATTTGTCTACATATTCAAAGTCACACAACTCATTTATTTAGCTGTCATGACAACAACATTATTTCTACGAACTAAGATGCATCGCAATACGGTGGAGGATGGAGGAACTTACATGGGTGCCCTTTTCTTTGCTGTCACCGTTGCGATGTTCAATGGCATATCAGAGCTAAATATGGCCATCATGAAACTTCCTGTCTTTTACAAGCAAAGGGACCTTCTTTTCTATCCTGCATGGGCTTATTCTCTTCCCCCATGGATTCTCAAAATACCAATTGCCCTCATAGAAGTAGCTATTTGGGAAGGCATCTCTTACTATGCCATTGGCTTTGATCCTAATTTTGTGAGGCTTTTAAAACAGTACCTGATAATCCTGTGCATTAACCAGATGGCATCTTCGCTATTTCGGTTGATGGCAGCATTCGGAAGGGATGTTATAGTTGCAAATACTGTTGGAAGTTTTGCATTACTTATAGTTCTGGTTTTGGGAGGATTTGTGATTTCGCGAGAGAATGTGCACAAATGGTTTGTGTGGGGTTACTGGTCCTCACCACTGATGTATGGACAGAATGCTATAGCTGTGAATGAATTTCTTGGTCATAGTTGGAGAAAGGTTACTCCTAATTCCAATGAAACACTAGGAGTTTTGATACTGAAAACTCGTGGATTTTTCCCAGAAGCTTATTGGTATTGGATTGGAGTAGGAGCATTAATTGGTTATGTATTTTTGTATAATTTCCTGTTTACCTTGGCTTTGCAATATCTAAGTCCATTCAGAAAGGATCAAGCAGGGCTATCCCAAGAGAAATTGATTGAGAGAAATGCTTCAACAGCTGAAGAGTTGATTCAATTACCAAATGGAAAAATCTCTTCTGAAACAAAGATTGTAGAAGAAGCAAACTTACCATCCAGATCTTTTTCTGGAAGACTTAGTGATGATAAAGCTAACAGAAGTGGAAGGAAGGGTATGGTTCTTCCTTTTCAACCTCTATCTCTCACATTTGATGAGATAAAATATTCTGTAGACATGCCACAGGAAATGAAAAAGCAAGGAGTTTTTGAGGAACGTCTAGAACTTTTGAAGGGTGTTAGTGGTGTCTTTAGGCCAGGAGTACTAACAGCTCTGATGGGCGTAAGTGGTGCCGGTAAGACTACATTAATGGATGTTTTAGCTGGAAGGAAAACTGGTGGATATATTGAAGGAGGTATCACAATATCTGGGTACCCAAAGAGGCAAGAAACATTTGCTCGCATCTCAGGATATTGTGAACAATTTGATATCCACTCACCTAATGTTACAGTTTATGAATCTTTATTATATTCTGCATGGCTTCGGTTACCCCGTGAAGTTGATCACGCAACTAGAAAGATGTTCATTGAGGAAGTTATGGAGCTAGTAGAGCTTAATTCAATAAGAGAAGCGCTTGTTGGATTGCCAGGAGAGAATGGACTTTCAACCGAGCAGCGCAAGAGGCTTACAATTGCTGTTGAACTAGTAGCCAACCCATCAATAATATTCATGGATGAGCCAACCTCTGGCCTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACCGTGAGGAATACCGTGAACACGGGACGAACTGTGGTTTGCACCATCCACCAGCCAAGTATTGATATATTTGATGCCTTTGATGAGCTGTTACTTTTGAAGTTGGGAGGGGAGCAAATATATGCTGGTCCATTAGGCCACCACTGTTCCGATCTGATTCAGTACTTTGAGGCTATTCAAGGAGTTCCTAAGATCAAAGAAGGTTATAATCCTGCAACCTGGATGTTGGAAGTTACATCAGCAGGCACAGAAGCATCTCTTAAGGTCAACTTCACCAATGTGTACAGAAACTCAGAACTATACCGGAGAAACAAGCAATTGATCAAAGAGCTTAGTATACCTCCTGAAGGTTCAAGGGATCTACACTTTGATAGTCAGTATTCACAGACTTTGGTGACACAATGTAAAGTTTGTCTATGGAAACAGCATTTATCATACTGGAGAAACACATCATATACAGCAGTTAGACTCCTATTTACAATGCTAATAGCATTATTATTTGGGATCATATTTTGGGACATTGGCCTGAAAAGGAGAAAAGAGCAAGATCTTTTCAATGCTATGGGTTCAATGTATGCTGCAGTTACCTTCATCGGAGTACAAAATGGTGCCTCGGTGCAGCCTATAATAGCGGTAGAGAGAACCGTCTTCTACAGAGAGAGAGCTGCTGGAATGTATTCAGCTTTGCCATATGCACTTGCACAGGTTATTATTGAACTTCCCCACATCTTGGTTCAGACCCTGATGTACGGAATTATAGTATATGCCATGATGGGATTCGATTGGACCACATCAAAGTTCTTGTGGTATCTTTTCTTCATGTACTTCACTTTCTTATACTTCACCTTCTATGGTATGATGACCCTAGCCATTACCCCCAACGCACACGTTGCTGCCATATTGTCCAGTGCATTCTATGCAATATGGAGCCTTTTCTCAGGCTTCATTATTCCCTTATCTAGAATACCCATATGGTGGAAGTGGTACTATTGGATCTGCCCTGTTGCATGGACCTTGAACGGATTGGTGGCTTCGCAATATGGAGACAACAGGGACAAACTTGAGAATGGTCAAAGGGTTGAAGAATTTGTGAAGAGTTATTTTGGGTTTGAACATGAATTTCTTGGGGTAGTTGCAATTGTGGTGGCCGGTTTCTCAGTGTTGTTTGCACTTATCTTCGCCTTTGGAATCAAAGTATTCAACTTCCAAAAACGATGA 4341 0.41 MESSDISRVDSARASGSNIWRNNSMDVFSTSEREDDEEALKWAAIERLPTYLRIRRSILNNEDGKGREVDIKQLGLTERKIIVERLVKIAEEDNERFLLKLRERMDRVGLDIPTIEVRFEHINVEAQVYVGGRALPSMLNFFANVIEGFLNYLHIIPSPKKPLRILQNVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLDKDLNHSGRVTYNGHGLEEFVPQRTSAYISQYDNHIGEMTVRETLAFSARCQGVGQNYEMLAELLRREKHAKIKPDPDIDAYMKAAALGRQRTSVVTDYILKILGLEVCADIMVGDGMIRGISGGQKKRVTTGEMLVGPIKVLFMDEISTGLDSSTTFQIINSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVVEFFESMGFKCPERKGVADFLQEVTSIKDQWQYWARKDEPYSFVTVKEFTEAFQLFHIGQNLGEELACPFDKSKCHPNVLTTKKYGVNKKELLRACASREFLLMKRNSFVYIFKVTQLIYLAVMTTTLFLRTKMHRNTVEDGGTYMGALFFAVTVAMFNGISELNMAIMKLPVFYKQRDLLFYPAWAYSLPPWILKIPIALIEVAIWEGISYYAIGFDPNFVRLLKQYLIILCINQMASSLFRLMAAFGRDVIVANTVGSFALLIVLVLGGFVISRENVHKWFVWGYWSSPLMYGQNAIAVNEFLGHSWRKVTPNSNETLGVLILKTRGFFPEAYWYWIGVGALIGYVFLYNFLFTLALQYLSPFRKDQAGLSQEKLIERNASTAEELIQLPNGKISSETKIVEEANLPSRSFSGRLSDDKANRSGRKGMVLPFQPLSLTFDEIKYSVDMPQEMKKQGVFEERLELLKGVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGGITISGYPKRQETFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPREVDHATRKMFIEEVMELVELNSIREALVGLPGENGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPLGHHCSDLIQYFEAIQGVPKIKEGYNPATWMLEVTSAGTEASLKVNFTNVYRNSELYRRNKQLIKELSIPPEGSRDLHFDSQYSQTLVTQCKVCLWKQHLSYWRNTSYTAVRLLFTMLIALLFGIIFWDIGLKRRKEQDLFNAMGSMYAAVTFIGVQNGASVQPIIAVERTVFYRERAAGMYSALPYALAQVIIELPHILVQTLMYGIIVYAMMGFDWTTSKFLWYLFFMYFTFLYFTFYGMMTLAITPNAHVAAILSSAFYAIWSLFSGFIIPLSRIPIWWKWYYWICPVAWTLNGLVASQYGDNRDKLENGQRVEEFVKSYFGFEHEFLGVVAIVVAGFSVLFALIFAFGIKVFNFQKR* 1447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1750 1446 Gene3D - 153 456 IPR027417 -
Gso17g1750 1446 Pfam Plant PDR ABC transporter associated 719 780 IPR013581 -
Gso17g1750 1446 Pfam ABC transporter 166 348 IPR003439 GO:0005524
Gso17g1750 1446 Pfam ABC transporter 877 1029 IPR003439 GO:0005524
Gso17g1750 1446 SMART AAA_5 886 1078 IPR003593 -
Gso17g1750 1446 SMART AAA_5 175 400 IPR003593 -
Gso17g1750 1446 Pfam ABC-transporter N-terminal 90 141 IPR029481 -
Gso17g1750 1446 PANTHER ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN 9 1446 - -
Gso17g1750 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 423 IPR003439 GO:0005524
Gso17g1750 1446 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1446 - -
Gso17g1750 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 873 1087 IPR027417 -
Gso17g1750 1446 CDD ABCG_PDR_domain2 846 1084 IPR034003 -
Gso17g1750 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 423 IPR027417 -
Gso17g1750 1446 Pfam ABC-2 type transporter 381 432 IPR043926 GO:0140359
Gso17g1750 1446 Gene3D - 863 1099 IPR027417 -
Gso17g1750 1446 Pfam ABC-2 type transporter 502 714 IPR013525 GO:0016020|GO:0140359
Gso17g1750 1446 Pfam ABC-2 type transporter 1174 1388 IPR013525 GO:0016020|GO:0140359
Gso17g1750 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 849 1101 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1750 Gso-Chr17 33998695 34007210 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1750 K08711 - gmx:100810505 2830.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g1750 17 33998695 34007210 Gso4g0601 4 5792786 5800351 PCT
Gso17g1750 17 33998695 34007210 Gso6g0601 6 5538945 5546696 PCT