Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1747 ATGGAGGGCAGTGACACACCTAGAGTTGATGCTCAACGAGTGAGTAGTGGTTTCAACATGTGGAGGAGCCATTGCATGGGTGTTTTCTCAACTTCTGAACGTGAAGAAGATGAGGCAACTCTAAAGTGTGTTGCAATAGAGAGACTCCTTGCAAAGGCACGCATTATTAGGAGAAGAGACCTCAACCAAGTTGAAGGAAAAGAAGAAGAAGTTGACATCAAGCAATTAGAGTTATCAGAGAGAAAGAGTCTTCTAGAGAGACTTGTGAAGATACCAGAAGAAGAAAATGAGAGGTTCTTGTTGAAACTCAAGGAGAGGATGGACAGAGTTGGGCTTGAAATTCCAACAATTGAAGTTCGATTTGAGCATTTAAATGTTGAAGCACAAGTTTATGCTGGAAGCAGGGCATTTCCTACATTAATAAACTTCTTTGTGAATTTGCTTGAGGGGTTCTTAAATTCTCTTCACACAATTCGAAGTCCAAAGAAACCGCTACATATCCTTCAGAATGTTAGTGGAATCATAAAGCCTAGAAGAATGACATTGCTTTTAGGGCCACCAAGCTCTGGAAAGACCACTTTGCTGTTAGCGTTGACTGGAAGACTTGGTAAAGATTTGAAGCATTCTGGGAGAGTAACATACAATGGGCATGGACTTGAAGAGTTTGTGCCACAAAGGACATCAGCTTATGTAAGTCAACGTGATAATCACATTGGAGAAATGACTGTGAGAGAAACATTAGCTTTCTCTGCCAGATGTCAAGGAATTGGACAGAATTACGAAATTTTGACGGACCTATTGAGAAGAGAGAAGGAAGCAAATATTGAACCAGATCCTGATATTGATGCCTATATGAAGGCAGCAGCACTAGAAGGAAAGCAGACCAGTGTGGTCATTGACTACATTCTCAAGGTTTTAGGACTTGAAGTGTGTGCTGACATCATGGTAGGAGATGAAATGATAAGAGGTATCTCGGGAGGGCAGAAAAAGCGACTCACAGCAGGCGAGATGCTGGTTGGACCTATAAGGGTGTTTTTCATGGATGAGATATCAACCGGTTTGGACAGTTCCACAACTTTTCAAATAATCAACTCTATCCAGCAATCCATCCATATTCTGAATGGAACTGCACTTGTGTCTCTGCTACAGCCAGCCCCAGAAACTTATGAACTATTTGATGATATAATACTATTAACAGATGGCCAAATTGTGTACCAAGGACCAAGAGAAAATGTACTTGAGTTTTTTGAATCAACGGGATTCAAGTGTCCTGAAAGAAAAGGAGTAGCTGATTTCTTACAAGAAGTGACATCAAGAAAAGATCAATGGCAATATTGGGCGCATAAAGAAGAACCTTATAGCTTTGTCACTGTCAAGAATTTTGCTGAAGCCTTCCAGTCATTTCACATAGGTCAACAACTTGGAGATGAGTTGGCCAATCCTTTTGACAAGTCTAAATGTCATCCATATGCATTGACCACAAAGAACTATGGTGTTAAGAAGAAGGAGCTGTTGAAGGCTTGTGCTAGCAGAGAATTTTTGCTTATGAAGCGCAATTCCTTCGTCTACATATTCAAAGCCACACAACTTACTTATTTAGCTATATTGACAACAACATTATTTCTACGAACCAAGATGAGCCGCAATACCTTGGCGGATGCAGAAGCTTACATGGGTGCTCTATTCTTCACAGTCACTGTTGCTCTGTTCAATGGAATATCAGAACTGAATATGGCCGTCATGAAACTTCCTGTCTTTTACAAGCAAAGAGACCAGCTTTTTTACCCTTCATGGGCATATTCTTTTCCACCATGGATCCTCAAAATACCAATAACCCTTGTTGAAGTTTTCATCTGGGAGTGTATTGCTTATTATGCTATTGGCTTTGATCCAAATATTGGAAGGCTTCTAAAACAGTACTTGGTAATCTTTTGCATTAACCTGATGGCATCAGGGCTTTTTCGGATGATGGCTGCATTAGGAAGGAATATTGTAGTGGCAAACACTGCTGGGACATTTGCACTGCTTGCAGTTACAGCCTTTGGAGGATTTGTGATTTCACGAAAGGATGTGCACAAATGGTTGCTGTGGGGTTACTTTTCCTCACCACTGATGTATGGACAGGCTGCTATAGCTGTGAATGAATTTCTTGGGCATAGTTGGAGAAAGGTTAGTCCTAATTCCAATGAAACATTGGGAGTATTGATACTGAGATCTCATGGATTTTTCCCTGAAGCTTATTGGTATTGGATTGGAATAGGAGCATTGATCGGTTATGCTTTTCTGTTTAATTTTCTCTTCACCTTGGCTTTGCAATATCTCAATCCATTCAGAAATTATCAATCAGGGCTACCCCAAGAGAAGCTGCTCGAGAGAAATGCTTCAACAGCTGAAGAGTTCAATCAGTTACAAGCAAGAAAGAGCTCTTCTGATACAAAGATGGAAGAAGTTGGTGAAAATAACAAAGCTACTGATAGAGGAAAGAGAGGCATGGTTCTTCCTTTTCAACCTCTATCGCTCACTTTTGATGAGATAAGATACTCAGTAGACATGCCACAGGAAATGAAAAGTGAAGGAATCTCTGAGGATCGTCTAGAACTTTTGAAGGGTATTAGTGGTGCTTTTAGGCCAGGAGTACTAACAGCTCTGATGGGTATAAGTGGTGCTGGCAAGACTACTCTACTGGATGTTTTAGCTGGGAGGAAAACTAGCGGATACATCGAAGGAAGCATCACAATATCCGGATACCCAAAGAACCAAGAAACATTTGCTCGCATAGCAGGATACTGTGAACAATTTGATATCCACTCGCCCAATGTCACAGTTTATGAATCTTTGCTATATTCTGCATGGCTTCGTTTATCTCCCAAAGTTGATAAAGCAACTAGAAAGATGTTCATTGAGGAAGTTATGGAACTTGTAGAGCTTAATTCATTAAGAGAAGCACTTGTTGGATTGCCAGGAGAGACTGGACTGTCGACGGAGCAGCGCAAGAGGCTTACAATTGCAGTTGAACTTGTCGCCAACCCATCAATAATTTTCATGGATGAGCCAACCTCTGGCCTTGATGCTAGGGCAGCTGCAATTGTGATGAGAACTGTGAGGAACACCGTGGACACAGGACGCACTGTGGTTTGCACCATCCACCAACCAAGTATCGATATATTCGATGCCTTTGATGAGCTGCTACTTCTGAAATTGGGAGGGGAGCAGATATATGATGGTCCAATAGGAAACAACTCTTCCAATCTGATCCAGTACTTTGAGGCTATTCAAGGAATTCCTCAGATCAAAGATGGTTATAATCCAGCAACTTGGATGTTGGAAGTTACATCAGCAGCAAAAGAGGCAAATCTTAAGGTTGACTTAACAGAAGTGTACAAAAATTCAGAACTACACAGGAGAAACAAACAATTGATCCAGGAGCTTAGTTCACCTTCTCAAGGTTCAAAAGATCTATACTTTGATAGTCAGTATTCACAAAGTTTCGTGGCACAATTCATAGCTTGCCTATGGAAACAGCATTTGTCATATTGGAGGAACACATCATATACCGCAGTTAGACTCCTATTTACAACAATGGCAGGTTTATTGATGGGGGTGATTTTTTTGGACGTTGGCAAGAAAAGTCACAGGAGAAAGGAGCAAGATGTTTTCAACGCAATGGGTTCAATGTATGCTGCTGTTACCTCCATTGGGGTTATAAATGGTGCCTCAGTGCAGCCTATAGTAGCAATTGAGAGAAATGTATTCTATAGGGAGAGAGCTGCAGGAATGTATTCAGCTTTGCCATATGCTCTTGCACAGGTTATTATAGAGCTTCCCCACATCTTGGCTCAGGCTCTGATATATGGTCTCATAGTATATGCCATGATGGGGTTCGAATGGACAACATCAAAGGTCTTCTGGTATCTCTACTACACTTACTTTACTTTCCTATACTACACTTTCTATGGTATGATGACCATGGCCATAACTCCTAACCCACATGTTGCGGCCATATTGTCCACCTCATTCTATGCAATATGGTGCCTTTTCTCAGGCTTCATCATTCCCTTATCGAGAATACCCGTATGGTGGAAATGGTACTATTGGATTTGCCCTGTTTCATGGACCTTGTATGGATTGGTGGCTTCCCAATATGGAGATGACATGGACAAACTTGAAAATGGTCAAAGGATTGATGAATTTGTGAAGAGATATTTTGGGTTTGAACATGATTTTCTAGGAGTAGTTGCAATTGTGGTGGCTGGTTTCTCAGTGTTGTTTGCACTTATCTTCGCCTTTGGAATCAAAGTATTCAACTTTCAAAAACGATGA 4320 0.4104 MEGSDTPRVDAQRVSSGFNMWRSHCMGVFSTSEREEDEATLKCVAIERLLAKARIIRRRDLNQVEGKEEEVDIKQLELSERKSLLERLVKIPEEENERFLLKLKERMDRVGLEIPTIEVRFEHLNVEAQVYAGSRAFPTLINFFVNLLEGFLNSLHTIRSPKKPLHILQNVSGIIKPRRMTLLLGPPSSGKTTLLLALTGRLGKDLKHSGRVTYNGHGLEEFVPQRTSAYVSQRDNHIGEMTVRETLAFSARCQGIGQNYEILTDLLRREKEANIEPDPDIDAYMKAAALEGKQTSVVIDYILKVLGLEVCADIMVGDEMIRGISGGQKKRLTAGEMLVGPIRVFFMDEISTGLDSSTTFQIINSIQQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVLEFFESTGFKCPERKGVADFLQEVTSRKDQWQYWAHKEEPYSFVTVKNFAEAFQSFHIGQQLGDELANPFDKSKCHPYALTTKNYGVKKKELLKACASREFLLMKRNSFVYIFKATQLTYLAILTTTLFLRTKMSRNTLADAEAYMGALFFTVTVALFNGISELNMAVMKLPVFYKQRDQLFYPSWAYSFPPWILKIPITLVEVFIWECIAYYAIGFDPNIGRLLKQYLVIFCINLMASGLFRMMAALGRNIVVANTAGTFALLAVTAFGGFVISRKDVHKWLLWGYFSSPLMYGQAAIAVNEFLGHSWRKVSPNSNETLGVLILRSHGFFPEAYWYWIGIGALIGYAFLFNFLFTLALQYLNPFRNYQSGLPQEKLLERNASTAEEFNQLQARKSSSDTKMEEVGENNKATDRGKRGMVLPFQPLSLTFDEIRYSVDMPQEMKSEGISEDRLELLKGISGAFRPGVLTALMGISGAGKTTLLDVLAGRKTSGYIEGSITISGYPKNQETFARIAGYCEQFDIHSPNVTVYESLLYSAWLRLSPKVDKATRKMFIEEVMELVELNSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYDGPIGNNSSNLIQYFEAIQGIPQIKDGYNPATWMLEVTSAAKEANLKVDLTEVYKNSELHRRNKQLIQELSSPSQGSKDLYFDSQYSQSFVAQFIACLWKQHLSYWRNTSYTAVRLLFTTMAGLLMGVIFLDVGKKSHRRKEQDVFNAMGSMYAAVTSIGVINGASVQPIVAIERNVFYRERAAGMYSALPYALAQVIIELPHILAQALIYGLIVYAMMGFEWTTSKVFWYLYYTYFTFLYYTFYGMMTMAITPNPHVAAILSTSFYAIWCLFSGFIIPLSRIPVWWKWYYWICPVSWTLYGLVASQYGDDMDKLENGQRIDEFVKRYFGFEHDFLGVVAIVVAGFSVLFALIFAFGIKVFNFQKR* 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1747 1439 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 840 1093 IPR003439 GO:0005524
Gso17g1747 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 425 IPR027417 -
Gso17g1747 1439 Pfam ABC-2 type transporter 1166 1381 IPR013525 GO:0016020|GO:0140359
Gso17g1747 1439 Pfam ABC-2 type transporter 504 716 IPR013525 GO:0016020|GO:0140359
Gso17g1747 1439 Pfam ABC transporter 868 1020 IPR003439 GO:0005524
Gso17g1747 1439 Pfam ABC transporter 168 350 IPR003439 GO:0005524
Gso17g1747 1439 Gene3D - 854 1088 IPR027417 -
Gso17g1747 1439 Pfam ABC-2 type transporter 383 434 IPR043926 GO:0140359
Gso17g1747 1439 Gene3D - 154 463 IPR027417 -
Gso17g1747 1439 SMART AAA_5 877 1069 IPR003593 -
Gso17g1747 1439 SMART AAA_5 177 402 IPR003593 -
Gso17g1747 1439 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 152 425 IPR003439 GO:0005524
Gso17g1747 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 863 1078 IPR027417 -
Gso17g1747 1439 PANTHER ATP-BINDING CASSETTE TRANSPORTER 19 1439 - -
Gso17g1747 1439 CDD ABCG_PDR_domain2 837 1075 IPR034003 -
Gso17g1747 1439 Pfam Plant PDR ABC transporter associated 721 781 IPR013581 -
Gso17g1747 1439 CDD ABCG_PDR_domain1 150 407 IPR034001 -
Gso17g1747 1439 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 19 1439 - -
Gso17g1747 1439 Coils Coil 786 806 - -
Gso17g1747 1439 Pfam ABC-transporter N-terminal 77 143 IPR029481 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1747 Gso-Chr17 33880658 33891175 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1747 K08711 - gmx:100800368 2794.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1038 14 16612685 16621522 Gso17g1747 17 33880658 33891175 GST
Gso4g0601 4 5792786 5800351 Gso17g1747 17 33880658 33891175 PCT
Gso6g0601 6 5538945 5546696 Gso17g1747 17 33880658 33891175 PCT