Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1735 ATGGTTAGAGAAGATGCTGTAATGGGTGGTGCCAGTGAAGAGCGTGGTGTTCGGGTCACTCGAGCAATGGCTAGAGCTGTTTTGGGTGGGGTCTCTGCCTCTTCTAGACCGTCCTTCAAGAAGCAACACAAGAACAACAAAGGTTTCGGTAGGGTAGCACTAGCAGATGTCACTAACATAAGCAAGAAAGGGTGTGCTACATCAAAATCTCAGGCAAGAGGAGGTTACAAGAAGACTAACACAAAGGGAGCTTCCAATGTCTCCATTCAAGTTTTGTCAACTCAAGAAGATGTTAGAGCAAAATTAGCAAAAGATTTACCCTCAATATCAATGGTACAGTCACATGACGCTAATGCAGCTGAAAGGCAGGAAGGCACAGAGGTAGTGCAACCTTCTATGTCTGTTATGGCAGGTCCTCGGCTTTCAATGCAGGACTCTACGAAGTCTGATGAAATCCTTCGCTCTCCAAACAAAGACGTTGATATGATGATTACTGAGAAACTAAAACTTTCAGATGGTTTGGACATTGTGGACATTGATTCAGTGGAGTTAAAGGATCCTCAAGTTTGGAGTTCATATGCCCCTGATATATACAATAGTATATTTGTCAGGGAGTTTGAAAGGAGACCGTTAAGTGATTACATGGATATGTTGCAGCAAGATATCACTCCAAGCATGCGAGGGATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGCTACTTCCAGATACTCTTTACCTTACAGTGAATCTGATTGATCGGTCTCTTTCTCAAAGTTTGGTTCAGAAACAAAGGCTCCAGTTGCTGGGTGTTACTTGCATGCTGATTGCATCAAAGTATGAAGAGATTTGTGCTCCTCGAGTGGAAGAATTTTGCTTCATCACAGATAATACGTACACAAAAGCAGAGGTATTGAAAATGGAGAGTGAGGTTCTAAATCTGTTGCATTTTCAGTTATCTGTTCCCACCACAAAAACATTTCTCAGGAGGTTCATCCTAGCATCAGAATCTTCTTACAAGGTTTCATATGTTGAACTGGAATTTCTGGCAAATTATTTAGCAGAGCTTACTCTTGTTGAATACAGCTTCTTGCAGTTTCTACCTTCCTTGATAGCTGCATCTGCTGTATTACTCGCCAGATGGACCCCCAACCAATCAGAGCATCCATGGAATTCAACCATGGAACACTATACGAATTACAAAGTGTCAGAGCTTAAAACTACCGTCCTTGCACTGGCAGATTTGCAACATGATATGAAAGGCTGTTCTCTGAATTCTATACGCGAAAAATATAAACAGCAGAAGGAGTGTGGCAAATTTGTCTCCGAAACCGGTGCAGTCACTTTTCAAGGCTCAAGTATAAAACTGTAA 1380 0.4181 MVREDAVMGGASEERGVRVTRAMARAVLGGVSASSRPSFKKQHKNNKGFGRVALADVTNISKKGCATSKSQARGGYKKTNTKGASNVSIQVLSTQEDVRAKLAKDLPSISMVQSHDANAAERQEGTEVVQPSMSVMAGPRLSMQDSTKSDEILRSPNKDVDMMITEKLKLSDGLDIVDIDSVELKDPQVWSSYAPDIYNSIFVREFERRPLSDYMDMLQQDITPSMRGILIDWLVEVSEEYKLLPDTLYLTVNLIDRSLSQSLVQKQRLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKAEVLKMESEVLNLLHFQLSVPTTKTFLRRFILASESSYKVSYVELEFLANYLAELTLVEYSFLQFLPSLIAASAVLLARWTPNQSEHPWNSTMEHYTNYKVSELKTTVLALADLQHDMKGCSLNSIREKYKQQKECGKFVSETGAVTFQGSSIKL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1735 459 Gene3D - 196 438 - -
Gso17g1735 459 PANTHER CYCLIN-A2-4 46 439 - -
Gso17g1735 459 PANTHER CYCLINS 46 439 IPR039361 -
Gso17g1735 459 Gene3D - 210 323 - -
Gso17g1735 459 CDD CYCLIN 323 415 IPR013763 -
Gso17g1735 459 SMART cyclin_7 329 417 IPR013763 -
Gso17g1735 459 SMART cyclin_7 232 316 IPR013763 -
Gso17g1735 459 PIRSF Cyclin_A_B_D_E 12 450 IPR039361 -
Gso17g1735 459 SUPERFAMILY Cyclin-like 324 438 IPR036915 -
Gso17g1735 459 Pfam Cyclin, C-terminal domain 325 438 IPR004367 -
Gso17g1735 459 SUPERFAMILY Cyclin-like 185 322 IPR036915 -
Gso17g1735 459 Pfam Cyclin, N-terminal domain 196 323 IPR006671 -
Gso17g1735 459 CDD CYCLIN 226 315 IPR013763 -
Gso17g1735 459 SMART Cyclin_C_2 325 446 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1735 Gso-Chr17 33537705 33544796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1735 3 438 Core Cell Cycle Gene Families AT5G25380 50.000 7.58e-139 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1735 K06627 - gmx:100805701 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1045 14 17589904 17596657 Gso17g1735 17 33537705 33544796 GST
Gso17g1735 17 33537705 33544796 Gso4g0612 4 5924018 5935265 PCT
Gso17g1735 17 33537705 33544796 Gso6g0610 6 5672315 5678113 PCT
Gso4g0612 4 5924018 5935265 Gso17g1735 17 33537705 33544796 PCT
Gso6g0610 6 5672315 5678113 Gso17g1735 17 33537705 33544796 PCT