Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1713 ATGTTCTCCGGCTCCCAGTTCGACGCCACCACCGCCTTCTCCGGCGGCGGTTTCATGTCTTCTCAGCCGTCTACCCTCAACGATTCCTCTCCCGCGCCGTCAAAAAGCCGCGAAACTCAGGGTTTGGTGCCAGTGACAGTGAAGCAGATAAGCGAGGCCTCTCAATCCGGTGATGAAAAGTCGAATTTCGTGATCAACGGTGTAGATCTGAACAATGTAACACTGCTTGGGATGGTGTTTGAGAAAGTTGAGAGAAATACTGATGTCAATTTTGTTTTGGATGATGGAACAGGACGCATCAAATGTCGAAGATGGGTTAATGAGGCTTTTGACACAAAGGAAATGGAGGCAGTGATGCCTGTCACAAATTTTGATGAGATCCCTTTTCACTTTATTGATTGCATACATAACCATCTTCGCTCCAAAATAAAGATGGAAGGAATCACTTCTTCAAATCCTTCATCTGGCTCATCTTTGAACACTCCTGGCAAAAGTGCACCAAATGGATCTCAGGCACCATCATCAAATCCAGTAAGTGCACAGCATAGCGTGGATGGACTTAAGGGTATTGATAAATTGATTATGGACTACCTGGAGCAGCATTCAGATATGTCAGATGGACGTGGAATACATGTTGATGAACTATCACGGGAGCTCAAGCTTCCAATGGAAAAGATCAAGTTGTCGTTGAAGGCTCTTGCAGATGATGGAGAAATATACTCCACCATAGATGACGACCATTACAAAAAAGCTTGA 756 0.4484 MFSGSQFDATTAFSGGGFMSSQPSTLNDSSPAPSKSRETQGLVPVTVKQISEASQSGDEKSNFVINGVDLNNVTLLGMVFEKVERNTDVNFVLDDGTGRIKCRRWVNEAFDTKEMEAVMPVTNFDEIPFHFIDCIHNHLRSKIKMEGITSSNPSSGSSLNTPGKSAPNGSQAPSSNPVSAQHSVDGLKGIDKLIMDYLEQHSDMSDGRGIHVDELSRELKLPMEKIKLSLKALADDGEIYSTIDDDHYKKA* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1713 251 MobiDBLite consensus disorder prediction 147 183 - -
Gso17g1713 251 SUPERFAMILY "Winged helix" DNA-binding domain 185 249 IPR036390 -
Gso17g1713 251 MobiDBLite consensus disorder prediction 147 182 - -
Gso17g1713 251 Gene3D - 181 251 IPR036388 -
Gso17g1713 251 Pfam Replication protein A C terminal 153 246 IPR014892 -
Gso17g1713 251 Gene3D - 34 118 IPR012340 -
Gso17g1713 251 SUPERFAMILY Nucleic acid-binding proteins 42 140 IPR012340 -
Gso17g1713 251 MobiDBLite consensus disorder prediction 13 44 - -
Gso17g1713 251 PANTHER REPLICATION PROTEIN A-RELATED 1 119 IPR040260 -
Gso17g1713 251 PANTHER REPLICATION PROTEIN A-RELATED 118 251 IPR040260 -
Gso17g1713 251 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 118 251 - -
Gso17g1713 251 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 1 119 - -
Gso17g1713 251 PIRSF RPA32 114 251 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gso17g1713 251 PIRSF RPA32 1 119 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1713 Gso-Chr17 32373870 32378018 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1713 1 249 Core DNA Replication Machinery Family AT2G24490 43.525 6.02e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1713 K10739 - gmx:100802512 484.182